Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30669
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          28   0.086
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      28   0.086
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.80 
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           25   0.80 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.80 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 0.086
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 266 LDLNTILPKVGVSKIFQEPAPGIVKHDQVVVSKAFQEAFVKVDEEGAT 409
           +++N+     G+ +IF  PA   +KHD V + K F   F+++D    T
Sbjct: 505 ININSDKETKGMMRIFLGPAFDEIKHDMVYLQKYFY-LFMEMDRFAVT 551


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 0.086
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 266 LDLNTILPKVGVSKIFQEPAPGIVKHDQVVVSKAFQEAFVKVDEEGAT 409
           +++N+     G+ +IF  PA   +KHD V + K F   F+++D    T
Sbjct: 505 ININSDKETKGMMRIFLGPAFDEIKHDMVYLQKYFY-LFMEMDRFAVT 551


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 70  WVQR*SSYRTRSQDSVWSWFCPTK-LTDYLQCWRKRPKRVYLKTYLTY 210
           W Q  +S     Q   +   CPT+ + + ++C R RP R  ++T   +
Sbjct: 242 WTQTENSLEKAKQVGAFMG-CPTRNVKEMIRCLRYRPARAIVETLANF 288


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 70  WVQR*SSYRTRSQDSVWSWFCPTK-LTDYLQCWRKRPKRVYLKTYLTY 210
           W Q  +S     Q   +   CPT+ + + ++C R RP R  ++T   +
Sbjct: 113 WTQTENSLEKAKQVGAFMG-CPTRNVKEMIRCLRYRPARAIVETLANF 159


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 70  WVQR*SSYRTRSQDSVWSWFCPTK-LTDYLQCWRKRPKRVYLKTYLTY 210
           W Q  +S     Q   +   CPT+ + + ++C R RP R  ++T   +
Sbjct: 242 WTQTENSLEKAKQVGAFMG-CPTRNVKEMIRCLRYRPARAIVETLANF 288


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 16/74 (21%), Positives = 28/74 (37%)
 Frame = -2

Query: 555  LMCVCPSKEYLVFVKNRNRNGWSTLNGRDGGGLDSEDVGTAISPVKAPAVAPSSSTFTKA 376
            + C+   K Y++ ++       S +  R      S    T  S + AP    +++     
Sbjct: 894  IACLFSPKLYIILIRPERNVRQSMMPTRYSTTKSSAVTATNASSMIAPVALTAATCDQNK 953

Query: 375  SWKALETTTWSCLT 334
            + K   TTT  C T
Sbjct: 954  AVKKHITTTIDCST 967


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 399 SSSTFTKASWKALETTTWSCLTMPGAGS 316
           S +  T AS  A  TTT +  T+P A +
Sbjct: 206 SKAGSTDASTPATVTTTGATTTLPAASA 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,516
Number of Sequences: 438
Number of extensions: 3297
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)