Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30667
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 44/84 (52%), Positives = 55/84 (65%)
 Frame = +1

Query: 256 RDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGAN 435
           RD  K+ + GKGVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGAN
Sbjct: 81  RDGDKAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGAN 140

Query: 436 AILGVSLXXXXXXXXXXNVPLYKH 507
           AILGVSL           +PLYK+
Sbjct: 141 AILGVSLAVAKAGAVHKGLPLYKY 164



 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 40/49 (81%), Positives = 43/49 (87%)
 Frame = +2

Query: 107 KMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALE 253
           +M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALE
Sbjct: 31  RMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALE 79



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 507 LADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMI 617
           +A+LAG   +VLPVPAFNVINGGSHAGNKLAMQEFMI
Sbjct: 165 IAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMI 201


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 44/84 (52%), Positives = 55/84 (65%)
 Frame = +1

Query: 256 RDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGAN 435
           RD  K+ + GKGVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGAN
Sbjct: 50  RDGDKAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGAN 109

Query: 436 AILGVSLXXXXXXXXXXNVPLYKH 507
           AILGVSL           +PLYK+
Sbjct: 110 AILGVSLAVAKAGAVHKGLPLYKY 133



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = +2

Query: 110 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALE 253
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALE
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALE 48


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 44/84 (52%), Positives = 55/84 (65%)
 Frame = +1

Query: 256 RDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGAN 435
           RD  K+ + GKGVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGAN
Sbjct: 50  RDGDKAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGAN 109

Query: 436 AILGVSLXXXXXXXXXXNVPLYKH 507
           AILGVSL           +PLYK+
Sbjct: 110 AILGVSLAVAKAGAVHKGLPLYKY 133



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = +2

Query: 110 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALE 253
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALE
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALE 48



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 507 LADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMI 617
           +A+LAG   +VLPVPAFNVINGGSHAGNKLAMQEFMI
Sbjct: 134 IAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMI 170


>Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 229 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 140
           GGT  +     A+  + IN+HC++  +++D
Sbjct: 35  GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64


>Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 229 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 140
           GGT  +     A+  + IN+HC++  +++D
Sbjct: 35  GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,370,594
Number of Sequences: 27780
Number of extensions: 247616
Number of successful extensions: 660
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)