Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30667
         (622 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g74030.1 68414.m08573 enolase, putative similar to Swiss-Prot...    99   2e-21
At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696 ...    71   5e-13
At2g29560.1 68415.m03590 enolase, putative similar to enolase [S...    67   8e-12
At1g64050.1 68414.m07255 expressed protein                             28   4.3  

>At1g74030.1 68414.m08573 enolase, putative similar to
           Swiss-Prot:P15007 enolase (EC 4.2.1.11)
           (2-phosphoglycerate dehydratase)(2-phospho-D- glycerate
           hydro-lyase) [Drosophila melanogaster]
          Length = 477

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 52/84 (61%), Positives = 59/84 (70%)
 Frame = +1

Query: 256 RDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGAN 435
           RD  KS Y GKGVL AIKNINEL+AP+L    ++V  Q ++D LML+LDGT NKSKLGAN
Sbjct: 97  RDGDKSVYGGKGVLQAIKNINELVAPKLI--GVDVRNQADVDALMLELDGTPNKSKLGAN 154

Query: 436 AILGVSLXXXXXXXXXXNVPLYKH 507
           AILGVSL           VPLYKH
Sbjct: 155 AILGVSLSVCRAGAGAKGVPLYKH 178



 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = +2

Query: 116 IKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALE 253
           +K +KARQI DSRGNPTVEVDL+T+  L+R+AVPSGASTG++EALE
Sbjct: 51  VKGVKARQIIDSRGNPTVEVDLITD-DLYRSAVPSGASTGIYEALE 95



 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +3

Query: 507 LADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMI 617
           + + +G  ++V+PVPAFNVINGGSHAGN LAMQEFMI
Sbjct: 179 IQETSGTKELVMPVPAFNVINGGSHAGNSLAMQEFMI 215


>At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696
           enolase (EC 4.2.1.11) (2-phosphoglycerate
           dehydratase)(2-phospho-D- glycerate hydro-lyase)
           [Arabidopsis thaliana]
          Length = 444

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = +3

Query: 507 LADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMI 617
           +A+LAGN  IVLPVPAFNVINGGSHAGNKLAMQEFMI
Sbjct: 139 IANLAGNPKIVLPVPAFNVINGGSHAGNKLAMQEFMI 175



 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 34/47 (72%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = +2

Query: 116 IKSIKARQIFDSRGNPTVEVDLVTELGL-FRAAVPSGASTGVHEALE 253
           I  +KARQIFDSRGNPTVEVD+ T  G+   AAVPSGASTG++EALE
Sbjct: 4   ITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALE 50



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
 Frame = +1

Query: 271 SEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELML-KLDGTEN-----KSKLGA 432
           S+Y GKGV  A+ N+N +I P L     + TQQ  ID  M+ +LDGT+N     K KLGA
Sbjct: 56  SDYLGKGVSKAVGNVNNIIGPALI--GKDPTQQTAIDNFMVHELDGTQNEWGWCKQKLGA 113

Query: 433 NAILGVSLXXXXXXXXXXNVPLYKH 507
           NAIL VSL           +PLYKH
Sbjct: 114 NAILAVSLAVCKAGAVVSGIPLYKH 138


>At2g29560.1 68415.m03590 enolase, putative similar to enolase
           [Spinacia oleracea] gi|8919731|emb|CAB96173
          Length = 475

 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +2

Query: 113 VIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALE 253
           VI  +KARQI DSRG PTVEVDL T  G+FRA+VPSG S+G +EA+E
Sbjct: 46  VITKVKARQILDSRGIPTVEVDLHTNKGVFRASVPSGDSSGTYEAIE 92



 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 38/84 (45%), Positives = 47/84 (55%)
 Frame = +1

Query: 256 RDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGAN 435
           RD  K  Y G  V  A+KNINE I+  L    ++   Q +ID+ M+ LD TE KS+LGAN
Sbjct: 94  RDGDKGMYLGNSVAKAVKNINEKISEALI--GMDPKLQGQIDQAMIDLDKTEKKSELGAN 151

Query: 436 AILGVSLXXXXXXXXXXNVPLYKH 507
           AIL VS+           VPL KH
Sbjct: 152 AILAVSIAACKAGAAEKEVPLCKH 175



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 23/54 (42%), Positives = 35/54 (64%)
 Frame = +3

Query: 456 SCC*GWCCQEKCSAVQALADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMI 617
           + C     +++    + L+DL+G  ++VLPVPAF V++GG HA N  A+QE MI
Sbjct: 159 AACKAGAAEKEVPLCKHLSDLSGRANMVLPVPAFTVLSGGKHASNTFAIQEIMI 212


>At1g64050.1 68414.m07255 expressed protein
          Length = 668

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 237 TPVEAPEGTAARNKPSSVTRSTSTVGLPRESKI 139
           +P+ +PE   +  K   ++RS+S  G PR +K+
Sbjct: 107 SPIASPESAESPRKRGKLSRSSSGNGTPRRTKL 139


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,707,522
Number of Sequences: 28952
Number of extensions: 231122
Number of successful extensions: 609
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)