Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30660x
(534 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 169 5e-41
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 153 3e-36
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 135 5e-31
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 97 2e-19
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 95 9e-19
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 95 9e-19
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 94 2e-18
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 6e-18
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 90 3e-17
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 83 5e-15
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 82 7e-15
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 75 8e-13
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 68 2e-10
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 67 2e-10
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 66 5e-10
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 8e-06
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 45 0.001
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 43 0.004
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 42 0.007
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 38 0.19
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.19
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 38 0.19
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.25
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.33
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.44
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 0.77
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 33 3.1
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 33 3.1
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q11I64 Cluster: Conserved repeat domain; n=1; Mesorhizo... 32 7.2
UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1; P... 32 7.2
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 32 7.2
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 7.2
UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57; Betaproteo... 32 9.5
UniRef50_A6DLJ4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 169 bits (410), Expect = 5e-41
Identities = 82/97 (84%), Positives = 85/97 (87%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 420
K SAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 47 KYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Query: 421 NPLQVLVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
NPLQVLV AIINSGPREDSTRIGRAGTVR + + P
Sbjct: 107 NPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 71.7 bits (168), Expect = 1e-11
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 128 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 253
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 153 bits (370), Expect = 3e-36
Identities = 70/92 (76%), Positives = 81/92 (88%)
Frame = +1
Query: 256 SAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQV 435
+AGRY+ KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV
Sbjct: 45 TAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQV 104
Query: 436 LVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
+V A++NSGPRED+TRIG AG VR + + P
Sbjct: 105 IVDAVVNSGPREDATRIGSAGVVRRQAVDISP 136
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 EIKLFGRWSCYDVQVSDMSLQDYIS-VKEKYAKYLP 253
E+KLF RWS DVQ+SD+SL DYI V K+A Y+P
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVP 43
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 135 bits (327), Expect = 5e-31
Identities = 67/92 (72%), Positives = 76/92 (82%)
Frame = +1
Query: 256 SAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQV 435
+AGR+ KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQV
Sbjct: 51 TAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQV 110
Query: 436 LVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
LV A+ GPREDSTRIG AGTVR + + P
Sbjct: 111 LVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 97.1 bits (231), Expect = 2e-19
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = +1
Query: 289 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR 468
KA+ PI ER SLM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPR
Sbjct: 67 KARIPIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPR 126
Query: 469 EDSTRIGRAGTVR 507
ED+ RIGRAG++R
Sbjct: 127 EDTARIGRAGSMR 139
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 95.1 bits (226), Expect = 9e-19
Identities = 44/99 (44%), Positives = 65/99 (65%)
Frame = +1
Query: 202 VSAGLHFR*REVRKIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 381
+S ++F ++ ++ S+G Y K F+K CPI+ERL SLM+ RN+GKK+ + IV
Sbjct: 38 ISNYIYFN-KKYGELVPHSSGNYDKKPFKKTYCPILERLVCSLMLKSRNSGKKIKTIAIV 96
Query: 382 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 498
KHAF ++H TG+NP+Q+LV AI N P EDS + +G
Sbjct: 97 KHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSG 135
Score = 35.5 bits (78), Expect = 0.77
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 149 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 253
++K+F RW V+++D+S+ +YI +KY + +P
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVP 53
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 95.1 bits (226), Expect = 9e-19
Identities = 47/85 (55%), Positives = 58/85 (68%)
Frame = +1
Query: 244 IFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 423
I + GRY + RF KA+ PIVERL N +M GRN GKK A IVK AF++I+ TG+N
Sbjct: 67 ILPHTEGRYQNTRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKN 126
Query: 424 PLQVLVTAIINSGPREDSTRIGRAG 498
PLQV + AIIN+ PRE+ TRI G
Sbjct: 127 PLQVFIDAIINTAPREEITRIIMGG 151
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 93.9 bits (223), Expect = 2e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +1
Query: 256 SAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQV 435
+ GR+A KRF KA+ PIVERL N +M +N GKK +A IVK AF+IIH TGENP+QV
Sbjct: 45 TGGRHAKKRFAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQV 104
Query: 436 LVTAIINSGPREDSTRI 486
LV A+ N+ PRE++T I
Sbjct: 105 LVQALENAAPREETTTI 121
Score = 35.9 bits (79), Expect = 0.58
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 149 EIKLFGRWSCYDVQVSDMSLQDYISVKEKY 238
E+K+FG+W +V+V D L+DYI +K Y
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY 41
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 6e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 292 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 447
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = +1
Query: 262 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 441
GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T ENP+QVLV
Sbjct: 60 GRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLV 119
Query: 442 TAIINSGPREDSTRIGRAG 498
+A+ N+ PRE++ R+ G
Sbjct: 120 SAVENAAPREETVRLKYGG 138
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 82.6 bits (195), Expect = 5e-15
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +1
Query: 244 IFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 423
I S+G++A ++F K++ IVERL N+LM N GKK + +R V+ AF+I++ T +N
Sbjct: 33 IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQN 92
Query: 424 PLQVLVTAIINSGPREDSTRIGRAG 498
P+QVLV AI N+GPRE+ R+ G
Sbjct: 93 PIQVLVDAIANAGPREEVVRLKYGG 117
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 82.2 bits (194), Expect = 7e-15
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 420
+I S G+++ + F KA IVERL N LM N GKK +A+ IV+ AFE+I+ T
Sbjct: 47 QIIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKR 106
Query: 421 NPLQVLVTAIINSGPREDSTRIGRAG 498
NP++VLV AI N+GPRE++ R+ G
Sbjct: 107 NPIEVLVEAIGNTGPREETVRLKYGG 132
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 75.4 bits (177), Expect = 8e-13
Identities = 40/92 (43%), Positives = 55/92 (59%)
Frame = +1
Query: 256 SAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQV 435
+AGR + K F K + +VERL N LM N GKK + I++ A I+ T ENP+QV
Sbjct: 41 TAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQV 100
Query: 436 LVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
+V A+ NSGPRE++TRI G L+ + P
Sbjct: 101 VVDALENSGPREETTRISYGGIAFLQSVDVSP 132
Score = 32.7 bits (71), Expect = 5.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 149 EIKLFGRWSCYDVQVSDMSLQDYISV 226
EIKLFG+W V V D SL+ +IS+
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISL 33
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 67.7 bits (158), Expect = 2e-10
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAV 372
++ + GR+A K F KA IVERL N +M G + N KK+ A
Sbjct: 45 RLLPHTHGRHAKKHFGKANVHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAY 104
Query: 373 RIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 486
+VK AF+II TG+NP+QVLV AI N+ PRED+T +
Sbjct: 105 EVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSV 142
Score = 36.7 bits (81), Expect = 0.33
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 149 EIKLFGRWSCYDVQVSDMSLQDYISVKEK 235
EIK+ GRWS DV+V D SL+ YI+++ +
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPR 45
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 394 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVR + + P
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 219
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 66.1 bits (154), Expect = 5e-10
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +1
Query: 256 SAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQV 435
+ GR+++ K +ERL N+LM + GKK A +++ AF+II T +NP+Q+
Sbjct: 30 TGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKKYSAYKVMSQAFDIIATKTKQNPVQI 89
Query: 436 LVTAIINSGPREDSTRIGRAG 498
LV+AI NS PRE+ TR+ G
Sbjct: 90 LVSAIENSAPREEVTRLKYGG 110
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 8e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 59 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 223
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = -2
Query: 398 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLP 261
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLP 46
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 43.2 bits (97), Expect = 0.004
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +1
Query: 277 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 456
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 457 SGP 465
+ P
Sbjct: 69 ASP 71
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 42.3 bits (95), Expect = 0.007
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +1
Query: 265 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 444
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 445 AIINSGP 465
+ GP
Sbjct: 161 TLDKLGP 167
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 37.5 bits (83), Expect = 0.19
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 268 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 447
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 448 IINSGPREDSTRIGRAGTVR 507
+ P +T++ + G +
Sbjct: 174 LDKMAPLM-ATKVQKTGAAK 192
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.19
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +1
Query: 307 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 465
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 37.5 bits (83), Expect = 0.19
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 301 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 477
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 478 TRIGRAGTVRLKP 516
RAG+++ P
Sbjct: 76 KPRRRAGSIQQVP 88
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.25
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 313 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 450
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 36.7 bits (81), Expect = 0.33
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 271 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 450
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 451 INSGPRED-STRIGRAGTVRLKPL 519
P TR + G+ R P+
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPI 90
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.44
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 301 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 465
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 0.77
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 301 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 465
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 33.5 bits (73), Expect = 3.1
Identities = 28/87 (32%), Positives = 38/87 (43%)
Frame = +1
Query: 271 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 450
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 451 INSGPREDSTRIGRAGTVRLKPLMFHP 531
P+ +AG R P+ P
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQP 92
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 33.5 bits (73), Expect = 3.1
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 208
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 209 QDYISVKEKYAKYLP 253
+ Y S + K+ + P
Sbjct: 259 KQYPSSEFKFKTFTP 273
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 4.1
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 483
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 484 IG 489
IG
Sbjct: 535 IG 536
>UniRef50_Q11I64 Cluster: Conserved repeat domain; n=1;
Mesorhizobium sp. BNC1|Rep: Conserved repeat domain -
Mesorhizobium sp. (strain BNC1)
Length = 1580
Score = 32.3 bits (70), Expect = 7.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 107 VVETMSLPQAADIP---EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPLQLAGMHT 277
VV+ LP A + ++ GRW D ++S+ +Q +I + Y P L+G HT
Sbjct: 675 VVDADGLPTFASMDVTLDVNGNGRWGVDDARLSEPGIQAFIDRGQILLDYFPPSLSGTHT 734
Query: 278 -SVS 286
SVS
Sbjct: 735 ISVS 738
>UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 592
Score = 32.3 bits (70), Expect = 7.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 80 DDVAEAGSVVVETMSLPQAADIPEIKLFGR 169
DD+ G VV++ +SL QAAD +++LF R
Sbjct: 56 DDLDSGGPVVIKELSLAQAADWKQVELFER 85
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 32.3 bits (70), Expect = 7.2
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +1
Query: 304 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 465
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMP 71
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 32.3 bits (70), Expect = 7.2
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 313 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 450
RL N L+ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAI 66
>UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57;
Betaproteobacteria|Rep: DNA topoisomerase III -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 881
Score = 31.9 bits (69), Expect = 9.5
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 453 DNGSHEYLQRVFSS*QVNNFKRMFDNTYGHQFFAIVPT 340
+N H++ +++ + V KR+FDNT FAI+PT
Sbjct: 353 NNNYHQFAKQITDNKWVKPNKRIFDNTKISDHFAIIPT 390
>UniRef50_A6DLJ4 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 511
Score = 31.9 bits (69), Expect = 9.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 179 YDVQVSDMSLQDYISVKEKYAKYLPLQLAGMHTSVSVKPSAQSWSAL 319
+DV SD++ DY + Y P++L H S VK +A S+ L
Sbjct: 178 FDVPFSDVTSFDYSEYNKSYNDIDPVELVSQHVSEYVKNNAYSFKEL 224
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,330,547
Number of Sequences: 1657284
Number of extensions: 10756791
Number of successful extensions: 26164
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 25485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26159
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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