Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30660x
(534 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 169 7e-42
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 169 7e-42
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 169 7e-42
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 169 7e-42
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 164 2e-40
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.27
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 2.6
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 2.6
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 2.6
L12398-1|AAB59386.1| 467|Homo sapiens dopamine receptor D4 prot... 30 5.9
L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor prot... 30 5.9
AB065765-1|BAC05985.1| 419|Homo sapiens seven transmembrane hel... 30 5.9
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 169 bits (410), Expect = 7e-42
Identities = 82/97 (84%), Positives = 85/97 (87%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 420
K SAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 47 KYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Query: 421 NPLQVLVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
NPLQVLV AIINSGPREDSTRIGRAGTVR + + P
Sbjct: 107 NPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 71.7 bits (168), Expect = 1e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 128 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 253
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 169 bits (410), Expect = 7e-42
Identities = 82/97 (84%), Positives = 85/97 (87%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 420
K SAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 47 KYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Query: 421 NPLQVLVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
NPLQVLV AIINSGPREDSTRIGRAGTVR + + P
Sbjct: 107 NPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 71.7 bits (168), Expect = 1e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 128 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 253
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 169 bits (410), Expect = 7e-42
Identities = 82/97 (84%), Positives = 85/97 (87%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 420
K SAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 47 KYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Query: 421 NPLQVLVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
NPLQVLV AIINSGPREDSTRIGRAGTVR + + P
Sbjct: 107 NPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 71.7 bits (168), Expect = 1e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 128 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 253
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 169 bits (410), Expect = 7e-42
Identities = 82/97 (84%), Positives = 85/97 (87%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 420
K SAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 47 KYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Query: 421 NPLQVLVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
NPLQVLV AIINSGPREDSTRIGRAGTVR + + P
Sbjct: 107 NPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 71.7 bits (168), Expect = 1e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 128 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 253
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 164 bits (399), Expect = 2e-40
Identities = 80/97 (82%), Positives = 83/97 (85%)
Frame = +1
Query: 241 KIFTSSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 420
K SAGRYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 47 KYLPHSAGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Query: 421 NPLQVLVTAIINSGPREDSTRIGRAGTVRLKPLMFHP 531
NPLQVLV AIINSGPREDSTRIGRAGTVR + + P
Sbjct: 107 NPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 71.7 bits (168), Expect = 1e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 128 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 253
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 292 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 447
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.27
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 263
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 263
C+C++R L GA GLYG C TC
Sbjct: 686 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 716
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVH 269
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 263
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVH 269
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 263
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVH 269
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 355 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 263
C+C++R L GA GLYG C TC
Sbjct: 523 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 553
>L12398-1|AAB59386.1| 467|Homo sapiens dopamine receptor D4
protein.
Length = 467
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 464 GPELIMAVTSTCRGF-SPVNK*IISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWAL 288
G L+ +T R +P N I+S A + A+ LPLF ++ G W L
Sbjct: 51 GNSLVCVSVATERALQTPTNSFIVSLAAADLLLALLVLPLFVYSEVQG-------GAWLL 103
Query: 287 RKRLCAYLPAEEVNILRTSL*RKCS 213
RLC L A +V + S+ C+
Sbjct: 104 SPRLCDALMAMDVMLCTASIFNLCA 128
>L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor
protein.
Length = 350
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 464 GPELIMAVTSTCRGF-SPVNK*IISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWAL 288
G L+ +T R +P N I+S A + A+ LPLF ++ G W L
Sbjct: 51 GNSLVCVSVATERALQTPTNSFIVSLAAADLLLALLVLPLFVYSEVQG-------GAWLL 103
Query: 287 RKRLCAYLPAEEVNILRTSL*RKCS 213
RLC L A +V + S+ C+
Sbjct: 104 SPRLCDALMAMDVMLCTASIFNLCA 128
>AB065765-1|BAC05985.1| 419|Homo sapiens seven transmembrane helix
receptor protein.
Length = 419
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 464 GPELIMAVTSTCRGF-SPVNK*IISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWAL 288
G L+ +T R +P N I+S A + A+ LPLF ++ G W L
Sbjct: 51 GNSLVCVSVATERALQTPTNSFIVSLAAADLLLALLVLPLFVYSEVQG-------GAWLL 103
Query: 287 RKRLCAYLPAEEVNILRTSL*RKCS 213
RLC L A +V + S+ C+
Sbjct: 104 SPRLCDALMAMDVMLCTASIFNLCA 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,560,646
Number of Sequences: 237096
Number of extensions: 1601197
Number of successful extensions: 3049
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3046
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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