Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30660x
(534 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 22 3.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 3.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 3.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 3.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 3.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 3.4
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 22 4.5
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 4.5
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 4.5
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 6.0
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 6.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.0
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 7.9
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 22.2 bits (45), Expect = 3.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 124 FTTSRRHS*NQAFRQMELLRCASL*YVSAGLHFR*REVRKIFTSSAGRYAHKRFRKAQ 297
FTT + S + FR+ + L A S+ LH +V+ F + R KR ++A+
Sbjct: 16 FTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWFQNR--RAKAKRLQEAE 71
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 277 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 378
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 277 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 378
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 277 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 378
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 277 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 378
+R R + I+ L+N + + NN KKL I
Sbjct: 72 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 277 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 378
+R R + I+ L+N + + NN KKL I
Sbjct: 305 ERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 338
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 483 DRSCGYSSSQAVDVSP 530
D+SC Y++S A +V+P
Sbjct: 145 DKSCRYTASLAGNVAP 160
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 326 EFVRRSTIGHWALRKRLCAYLPAEEV 249
EF R T AL K+LC PAE +
Sbjct: 585 EFPRSITRNATALIKKLCRDNPAERL 610
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.8 bits (44), Expect = 4.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 206 ETYQRLAHRSNSICRKA*FQECRRLVVKTWFP 111
+ Y+RL H N I ++ F RL T+ P
Sbjct: 240 QVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCP 271
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 376 IVKHAFEIIHLLTGENPLQVLVTAII 453
+++HAFEI +L P+ +++ I
Sbjct: 217 LIEHAFEISTMLFFVLPMTIIIVLYI 242
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 6.0
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -2
Query: 344 RPCIIREFVRRSTIGHWAL 288
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 6.0
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -2
Query: 344 RPCIIREFVRRSTIGHWAL 288
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 6.0
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -2
Query: 344 RPCIIREFVRRSTIGHWAL 288
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 35 FSNRKVPIMAEENWN 79
F N+K+P+ E W+
Sbjct: 550 FKNKKLPVFLAEIWD 564
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,791
Number of Sequences: 438
Number of extensions: 3068
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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