Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30659x
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012478-1|AAS93749.1|  341|Drosophila melanogaster RE15368p pro...    28   6.1  
BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p pro...    28   6.1  
AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation ...    28   6.1  
AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation ...    28   6.1  
AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-P...    28   6.1  
AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-P...    28   6.1  

>BT012478-1|AAS93749.1|  341|Drosophila melanogaster RE15368p
           protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 390 LDPSVRQNFPNSASYFISIITNTTISRKLKEY 295
           L+PSVR  F N   +F++I+    +   +K+Y
Sbjct: 192 LEPSVRSAFGNVNRWFVTILNQKQVQAVVKDY 223


>BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p
           protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 390 LDPSVRQNFPNSASYFISIITNTTISRKLKEY 295
           L+PSVR  F N   +F++I+    +   +K+Y
Sbjct: 201 LEPSVRSAFGNVNRWFVTILNQKQVQAVVKDY 232


>AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 390 LDPSVRQNFPNSASYFISIITNTTISRKLKEY 295
           L+PSVR  F N   +F++I+    +   +K+Y
Sbjct: 172 LEPSVRSAFGNVNRWFVTILNQKQVQAVVKDY 203


>AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 390 LDPSVRQNFPNSASYFISIITNTTISRKLKEY 295
           L+PSVR  F N   +F++I+    +   +K+Y
Sbjct: 101 LEPSVRSAFGNVNRWFVTILNQKQVQAVVKDY 132


>AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-PB,
           isoform B protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 390 LDPSVRQNFPNSASYFISIITNTTISRKLKEY 295
           L+PSVR  F N   +F++I+    +   +K+Y
Sbjct: 172 LEPSVRSAFGNVNRWFVTILNQKQVQAVVKDY 203


>AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-PA,
           isoform A protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 390 LDPSVRQNFPNSASYFISIITNTTISRKLKEY 295
           L+PSVR  F N   +F++I+    +   +K+Y
Sbjct: 172 LEPSVRSAFGNVNRWFVTILNQKQVQAVVKDY 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,045,854
Number of Sequences: 53049
Number of extensions: 270196
Number of successful extensions: 345
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)