Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30659x
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   1.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   1.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   1.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   1.8  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   7.1  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   7.1  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   7.1  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   7.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.4  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 334 HN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           HN +Y         N+++ Y I + +QIP+ V
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 334 HN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           HN +Y         N+++ Y I + +QIP+ V
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 334 HN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           HN +Y         N+++ Y I + +QIP+ V
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 334 HN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           HN +Y         N+++ Y I + +QIP+ V
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 337 YHN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           Y+N +YN    K +    +NY+    +QIP+ V
Sbjct: 97  YNNNNYNNNNYKKLQYYNINYI----EQIPIPV 125


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 337 YHN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           Y+N +YN    K +    +NY+    +QIP+ V
Sbjct: 97  YNNNNYNNNNYKKLQYYNINYI----EQIPIPV 125


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 337 YHN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           Y+N +YN    K +    +NY+    +QIP+ V
Sbjct: 97  YNNNNYNNNNYKKLQYYNINYI----EQIPIPV 125


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 337 YHN*HYNIKKIKGILNQEMNYLIAFYKQIPVAV 239
           Y+N +YN    K +    +NY+    +QIP+ V
Sbjct: 97  YNNNNYNNNNYKKLQYYNINYI----EQIPIPV 125


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 227 QLSLNVNQNQCQMHFIQTLES 165
           +LSL  N   C+  F+Q L S
Sbjct: 918 ELSLGSNPWSCRCKFLQELSS 938


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 456 LAPPLVKVRCDFCG 497
           L PP V   CD CG
Sbjct: 365 LLPPGVCYTCDVCG 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,017
Number of Sequences: 438
Number of extensions: 2090
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)