Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30657x
         (431 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   2.7  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   4.6  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   4.6  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 180  EGPQEITRVLELFSNSEDLMDEVLNQIMLCL 272
            E PQE  R L+   +S+D M   +NQ  + L
Sbjct: 958  EDPQEAGRKLKKLQDSKDKMSRNVNQKAMVL 988


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 141 GLLAPTTSWIVQFEGPQEITRVLELFSNSEDLMDEVLN 254
           GLLAPTTS   + E   ++  V+   S +   +DE+++
Sbjct: 2   GLLAPTTSCDGEEELQVQLRSVIITRSKAGATVDEIID 39


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 218 EKFKYASNFLWPFKLNNPTGGWRKKTIH 135
           E+F + ++  +P  +    G W K ++H
Sbjct: 14  EQFHFLNDLKYPVLIRQHLGNWIKDSLH 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,522
Number of Sequences: 2352
Number of extensions: 8675
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)