Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30655
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL392043-11|CAI39951.1|  222|Homo sapiens novel protein protein.       32   1.5  
X57130-1|CAA40409.1|  215|Homo sapiens histone H1 protein.             31   4.7  
BC112140-1|AAI12141.1|  215|Homo sapiens histone cluster 1, H1a ...    31   4.7  
BC101593-1|AAI01594.1|  215|Homo sapiens histone cluster 1, H1a ...    31   4.7  
BC069492-1|AAH69492.1|  215|Homo sapiens histone cluster 1, H1a ...    31   4.7  
BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetit...    31   4.7  
AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetit...    31   4.7  
AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetit...    31   4.7  
AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetit...    31   4.7  
AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetit...    31   4.7  
AF531299-1|AAN06699.1|  215|Homo sapiens histone H1 protein.           31   4.7  

>AL392043-11|CAI39951.1|  222|Homo sapiens novel protein protein.
          Length = 222

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -2

Query: 643 KRDSSSSEKDPKRGKNTDSIKENALSPEVAKLKKVEDTPAKVK 515
           K +  S EKD ++GK  + +KE   S   A +K++ED P  ++
Sbjct: 54  KENERSKEKDKEKGKE-EKVKEPKQSQSPAPIKQLEDLPMSIE 95


>X57130-1|CAA40409.1|  215|Homo sapiens histone H1 protein.
          Length = 215

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -2

Query: 634 SSSSEKDPKRGKN---TDSIKENALSPEVAKLKKVEDTPAKVKVDMLNLNLVTKTRKHLK 464
           S  S K PK+ K    T    +N   P+  K KKV  +PAK K           T+    
Sbjct: 146 SKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA 205

Query: 463 RGKRKSPLLK 434
           + K+ +P  K
Sbjct: 206 KPKKAAPKKK 215


>BC112140-1|AAI12141.1|  215|Homo sapiens histone cluster 1, H1a
           protein.
          Length = 215

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -2

Query: 634 SSSSEKDPKRGKN---TDSIKENALSPEVAKLKKVEDTPAKVKVDMLNLNLVTKTRKHLK 464
           S  S K PK+ K    T    +N   P+  K KKV  +PAK K           T+    
Sbjct: 146 SKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA 205

Query: 463 RGKRKSPLLK 434
           + K+ +P  K
Sbjct: 206 KPKKAAPKKK 215


>BC101593-1|AAI01594.1|  215|Homo sapiens histone cluster 1, H1a
           protein.
          Length = 215

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -2

Query: 634 SSSSEKDPKRGKN---TDSIKENALSPEVAKLKKVEDTPAKVKVDMLNLNLVTKTRKHLK 464
           S  S K PK+ K    T    +N   P+  K KKV  +PAK K           T+    
Sbjct: 146 SKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA 205

Query: 463 RGKRKSPLLK 434
           + K+ +P  K
Sbjct: 206 KPKKAAPKKK 215


>BC069492-1|AAH69492.1|  215|Homo sapiens histone cluster 1, H1a
           protein.
          Length = 215

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -2

Query: 634 SSSSEKDPKRGKN---TDSIKENALSPEVAKLKKVEDTPAKVKVDMLNLNLVTKTRKHLK 464
           S  S K PK+ K    T    +N   P+  K KKV  +PAK K           T+    
Sbjct: 146 SKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA 205

Query: 463 RGKRKSPLLK 434
           + K+ +P  K
Sbjct: 206 KPKKAAPKKK 215


>BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -3

Query: 219 NNEDLEKKLRERALKSMKK 163
           N +DLEK LRE+AL+SM+K
Sbjct: 879 NLDDLEKHLREKALRSMRK 897


>AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -3

Query: 219 NNEDLEKKLRERALKSMKK 163
           N +DLEK LRE+AL+SM+K
Sbjct: 879 NLDDLEKHLREKALRSMRK 897


>AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -3

Query: 219 NNEDLEKKLRERALKSMKK 163
           N +DLEK LRE+AL+SM+K
Sbjct: 888 NLDDLEKHLREKALRSMRK 906


>AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -3

Query: 219 NNEDLEKKLRERALKSMKK 163
           N +DLEK LRE+AL+SM+K
Sbjct: 879 NLDDLEKHLREKALRSMRK 897


>AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = -3

Query: 219 NNEDLEKKLRERALKSMKK 163
           N +DLEK LRE+AL+SM+K
Sbjct: 888 NLDDLEKHLREKALRSMRK 906


>AF531299-1|AAN06699.1|  215|Homo sapiens histone H1 protein.
          Length = 215

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -2

Query: 634 SSSSEKDPKRGKN---TDSIKENALSPEVAKLKKVEDTPAKVKVDMLNLNLVTKTRKHLK 464
           S  S K PK+ K    T    +N   P+  K KKV  +PAK K           T+    
Sbjct: 146 SKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA 205

Query: 463 RGKRKSPLLK 434
           + K+ +P  K
Sbjct: 206 KPKKAAPKKK 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,195,167
Number of Sequences: 237096
Number of extensions: 701362
Number of successful extensions: 1866
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1859
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)