Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30654
(657 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 204 1e-51
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 135 8e-31
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 124 1e-27
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 118 2e-25
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 116 4e-25
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 116 5e-25
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 113 5e-24
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 111 1e-23
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 104 2e-21
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 99 1e-19
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 94 2e-18
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 79 9e-14
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 79 1e-13
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 76 9e-13
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 75 2e-12
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 71 2e-11
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 71 3e-11
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 8e-11
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 69 8e-11
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 7e-10
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 66 7e-10
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 65 2e-09
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 64 2e-09
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 64 4e-09
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 63 5e-09
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 59 8e-08
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 59 8e-08
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 59 8e-08
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 58 2e-07
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 57 4e-07
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 54 3e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 53 7e-06
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 50 4e-05
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 50 6e-05
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 46 6e-04
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 41 0.023
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 39 0.12
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 1.1
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 2.6
UniRef50_Q980D5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 4.6
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 33 4.6
UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=... 33 6.0
UniRef50_A2Y1D8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1; ... 33 6.0
UniRef50_Q12215 Cluster: Cell wall integrity and stress response... 33 6.0
UniRef50_UPI0000F1F8B1 Cluster: PREDICTED: hypothetical protein;... 33 8.0
UniRef50_Q9VWU0 Cluster: CG15046-PA; n=2; Sophophora|Rep: CG1504... 33 8.0
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 204 bits (499), Expect = 1e-51
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 2e-37
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 135 bits (327), Expect = 8e-31
Identities = 66/104 (63%), Positives = 79/104 (75%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAE+V RGL A QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+SGKLR
Sbjct: 87 IYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAA 146
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIM 564
RAKS K+ DG MIHSG P + + RHVL+RQGVLGIKVKIM
Sbjct: 147 RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGIKVKIM 190
Score = 109 bits (263), Expect = 4e-23
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
+SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR 268
RI ELTS++ KRF + + + +R
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAER 91
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 124 bits (300), Expect = 1e-27
Identities = 59/107 (55%), Positives = 78/107 (72%)
Frame = +1
Query: 250 RMYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRC 429
+++AE+V RGL A+AQAESLR+KL+ L VRRA G++R++MESGA+GCEV + GK++
Sbjct: 136 QLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKG 195
Query: 430 QRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
QRAKSM F DG MI SG + +TRH LR G +G+ VKIM P
Sbjct: 196 QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRP 242
Score = 110 bits (264), Expect = 3e-23
Identities = 53/86 (61%), Positives = 68/86 (79%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
+SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR 268
RIRELT+ +Q+RFN E ++ +R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAER 141
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 118 bits (283), Expect = 2e-25
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = +1
Query: 340 VRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHSTRH 519
VR ACYGVLR+IMESGA+G EVVVSGKLR QRAK+MKF DG MI SG+P + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 520 VLLRQGVLGIKVKIMLPWDQQGKNGP 597
LLRQG +G++VKIML D +G++GP
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGP 115
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 116 bits (280), Expect = 4e-25
Identities = 52/118 (44%), Positives = 80/118 (67%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
++ +++ +GL A+ Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +SGKLR
Sbjct: 87 IFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRGA 146
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEEA 606
RA + K+ +G M+ SGD + + H+ ++Q +GI+V IML D G +GP+E+
Sbjct: 147 RASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIGIRVLIMLAQDPSGISGPKES 204
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +2
Query: 14 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 193
+K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ + GRR
Sbjct: 7 TKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGRR 66
Query: 194 IRELTSVVQKRFNIPEQSVECMLKR 268
++E+ ++QKR+ + E S+E + R
Sbjct: 67 LQEVRMMIQKRWRLKEDSLEIFIDR 91
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 116 bits (279), Expect = 5e-25
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +2
Query: 2 VNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 181
V +SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGE
Sbjct: 2 VTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGE 61
Query: 182 KGRRIRELTSVVQKRFNIPEQSVE 253
KG++I+ELTSVVQKRF E SVE
Sbjct: 62 KGKKIKELTSVVQKRFEFLENSVE 85
Score = 84.6 bits (200), Expect = 2e-15
Identities = 60/123 (48%), Positives = 70/123 (56%)
Frame = +1
Query: 220 EAIQHSRAICRMYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 399
E +++S +C AEKV RG AIAQAESLRYKL+GGLA+
Sbjct: 78 EFLENSVELC---AEKVNNRGFYAIAQAESLRYKLLGGLAM------------------- 115
Query: 400 EVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQ 579
L QRAKSMKF DG +I SG P + + RHVL RQGVLGIKVKIM WD
Sbjct: 116 -------LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHVL-RQGVLGIKVKIMFNWDP 167
Query: 580 QGK 588
+GK
Sbjct: 168 KGK 170
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 113 bits (271), Expect = 5e-24
Identities = 49/109 (44%), Positives = 78/109 (71%)
Frame = +1
Query: 250 RMYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRC 429
+++AE + +GLCA AQ E++ YKL+ + VR A +++ +++ GA+GCE+++SGKL+
Sbjct: 98 QIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISGKLKQ 157
Query: 430 QRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWD 576
QRAK+MKF G MI +G P + RHV +QG++G+KVKIMLP++
Sbjct: 158 QRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGVKVKIMLPYE 206
Score = 89.4 bits (212), Expect = 7e-17
Identities = 39/81 (48%), Positives = 59/81 (72%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
I+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+
Sbjct: 18 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 77
Query: 191 RIRELTSVVQKRFNIPEQSVE 253
+ +ELT +QKRF + ++
Sbjct: 78 KHKELTQFLQKRFGYSDDQIQ 98
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 111 bits (267), Expect = 1e-23
Identities = 54/112 (48%), Positives = 77/112 (68%)
Frame = +1
Query: 262 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAK 441
EKV +GLCA+ QA +R K++GG+ RRA L+ + A+GC+++VSGKL+ QRAK
Sbjct: 100 EKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAK 159
Query: 442 SMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGP 597
S+KF DG++IHSGD + V +QGV+GI+V+IMLP+D +G GP
Sbjct: 160 SVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGP 211
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/81 (29%), Positives = 49/81 (60%)
Frame = +2
Query: 26 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 205
+F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 206 TSVVQKRFNIPEQSVECMLKR 268
+ +R +P++SVE ++++
Sbjct: 81 QHLAAQRLEVPDESVEIVVEK 101
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 104 bits (249), Expect = 2e-21
Identities = 47/106 (44%), Positives = 72/106 (67%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
++ +K+ RGL A ++LR KL + +RRA Y ++R M +GA GCEV+V+GKLR Q
Sbjct: 92 IWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQ 151
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
RA++ KF +G +I +G P + +TRH+ +RQGV+G+KV+I P
Sbjct: 152 RARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRIYNP 197
Score = 41.5 bits (93), Expect = 0.017
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 26 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 205
K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 206 TSVVQKRF 229
++ RF
Sbjct: 76 EYLLAGRF 83
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 98.7 bits (235), Expect = 1e-19
Identities = 58/115 (50%), Positives = 70/115 (60%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEK R AIAQAESLR+KL+GGL VRRA YGVL F+MESG +GCEV+
Sbjct: 140 LYAEKFNNRVFYAIAQAESLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEVI-------- 191
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGP 597
+I SG P + RHVLL+QGVL IKVKI++ QG+ GP
Sbjct: 192 --------GWYIISSGQPVKDYINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +2
Query: 137 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVECMLKRW 271
EIII AT+TQ+VLG+KGR+IRELTSVVQKRF E +VE +++
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKF 145
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +2
Query: 14 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 184
SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/69 (56%), Positives = 44/69 (63%)
Frame = +1
Query: 373 IMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIK 552
+ ESGA+G E +VSGKL+ QRAKS KFVD MIHS D S HVLLRQGVLG K
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 553 VKIMLPWDQ 579
+ P Q
Sbjct: 140 CRSCFPGTQ 148
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 79.0 bits (186), Expect = 9e-14
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = +1
Query: 430 QRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPE 600
QRAKSMKF DG M+ SG P + + RHVLLRQGVLGIKVKIML WD GK GP+
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPK 58
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/103 (42%), Positives = 59/103 (57%)
Frame = +1
Query: 262 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAK 441
E++ L A QA L L G+ RRA Y LR IM +GARG E+ +SGKL +RAK
Sbjct: 83 EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAK 142
Query: 442 SMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
S++F G + G+P + L LL+ GV+G+KV IM P
Sbjct: 143 SIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIMPP 185
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/78 (37%), Positives = 51/78 (65%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
+R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 200 ELTSVVQKRFNIPEQSVE 253
ELT +++K+F + +E
Sbjct: 64 ELTRILEKQFGLENPQIE 81
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 75.8 bits (178), Expect = 9e-13
Identities = 42/102 (41%), Positives = 60/102 (58%)
Frame = +1
Query: 265 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKS 444
+V + L A A + L+ G+ RRA L IM +GARG E+V+SGKL QR ++
Sbjct: 85 EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRT 144
Query: 445 MKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
KF G + SG+P + L + HVLL+ G+ G+KV+IM P
Sbjct: 145 EKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIMKP 186
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +2
Query: 23 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 202
RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 203 LTSVVQKRFNIPEQSVE 253
+ V+++ F I ++
Sbjct: 66 IAEVLEREFGIENPQID 82
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/90 (43%), Positives = 56/90 (62%)
Frame = +1
Query: 301 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSG 480
A L L G RRA Y L IME+GA+GCE+ +SGKL +RA++ KFV G ++H+G
Sbjct: 95 ASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTG 154
Query: 481 DPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
DP + + Q + + GVLG+ V+I+ P
Sbjct: 155 DPAESMVQKGFDIAIKKLGVLGVSVRIIPP 184
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
+RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 200 ELTSVVQKRFNI--PEQSVE 253
LT + K F I P+ SV+
Sbjct: 64 ALTEKL-KDFGIENPQVSVD 82
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = +1
Query: 331 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHS 510
G+ R+ + +R +M SGA+G ++VSGKL +R+++ KF+DG M H G+P + L S
Sbjct: 105 GMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS 164
Query: 511 TRHVLLRQGVLGIKVKIMLP 570
+ L+ G++G+ VKIM P
Sbjct: 165 HQLAKLKLGIVGVTVKIMRP 184
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
+R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 200 ELTSVVQKRFNIPEQSVE 253
ELT + +++ +E
Sbjct: 63 ELTETLATEYSVKNPQIE 80
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/104 (38%), Positives = 58/104 (55%)
Frame = +1
Query: 259 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRA 438
A++V L A A L + G R+A + LR +M +GA GCEVV+SGKL R+
Sbjct: 82 AQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARS 141
Query: 439 KSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
+ KFVDG + HSG+P + + + + G LG KV+I+ P
Sbjct: 142 RVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVRIIQP 185
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/95 (31%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 200 ELTSVVQKRFNIPEQSVECM-LKRWLLVAFALSPR 301
+LT V ++++ ++ +KR L A ++ R
Sbjct: 64 KLTRDVANKYSLENPQIDAQEVKRPELNAQMMASR 98
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +2
Query: 80 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 214
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 69.3 bits (162), Expect = 8e-11
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +1
Query: 262 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAK 441
++V A AE L L G R+A +R IMESGA GCEV+V+GKL R++
Sbjct: 83 QQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSR 142
Query: 442 SMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
+ KF +G + H G+P + + + + + G +G++VKI+ P
Sbjct: 143 TQKFTEGYIKHCGEPSETIVEKGYALAIKKLGTIGVQVKIVPP 185
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/78 (33%), Positives = 49/78 (62%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 200 ELTSVVQKRFNIPEQSVE 253
+LT + ++I VE
Sbjct: 64 QLTQDLATDYDIESPQVE 81
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +2
Query: 80 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 217
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +2
Query: 80 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 214
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 80 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 175
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 66.1 bits (154), Expect = 7e-10
Identities = 25/81 (30%), Positives = 55/81 (67%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
++ +++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 191 RIRELTSVVQKRFNIPEQSVE 253
IR++T+ ++ RFN+ + V+
Sbjct: 61 NIRKITTELEDRFNLDDPQVD 81
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +1
Query: 301 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSG 480
A+ L L G R+A + + IMESGA G E+V+SGK+ R++ KF G + H+G
Sbjct: 96 ADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNG 155
Query: 481 DPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
+P + + +++ G +G++VKI+ P
Sbjct: 156 EPAEEIVDSGVGVAVMKLGTIGVRVKIIPP 185
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2
Query: 8 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 145
+ISK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/99 (42%), Positives = 54/99 (54%)
Frame = +1
Query: 265 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKS 444
KV L A A L L G RRA Y LR IM +GA G +V VSGKLR +RA+
Sbjct: 89 KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARF 148
Query: 445 MKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKI 561
K++ G + SG+ L + HVLL+ GV G++V I
Sbjct: 149 EKYIAGKVYKSGNQVVRLTDRAIAHVLLKVGVEGVEVII 187
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/77 (31%), Positives = 50/77 (64%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++G +G+ I+
Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68
Query: 200 ELTSVVQKRFNIPEQSV 250
++T V+++ F IP V
Sbjct: 69 QITKVLEEWFGIPNPQV 85
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/90 (38%), Positives = 50/90 (55%)
Frame = +1
Query: 301 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSG 480
A + L G+ RR Y +R IM +GA+G EV +SGK+R R+ + KF DG + G
Sbjct: 95 AHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCG 154
Query: 481 DPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
+P + V L+ GVLG+ V+IM P
Sbjct: 155 EPSVKHVREGFATVQLKPGVLGVYVRIMPP 184
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/78 (30%), Positives = 50/78 (64%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 200 ELTSVVQKRFNIPEQSVE 253
+T ++ +F++ VE
Sbjct: 63 AITQKLKNKFDLENPQVE 80
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/90 (36%), Positives = 51/90 (56%)
Frame = +1
Query: 301 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSG 480
A L L G+ RRA YG LR IM +GA+G +++SGKL RA++ KF++G + + G
Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCG 163
Query: 481 DPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
+P + + G +G+ V+IM P
Sbjct: 164 EPGDEYMIEGYVQAVTKPGAIGVTVRIMPP 193
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +2
Query: 8 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKG 187
N+ +KFV G+ K EL+E+L EL GY G+ ++ P ++II R +G +G
Sbjct: 7 NVPVHKKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRG 66
Query: 188 RRIRELTSVVQKRF 229
R IR + VQ+RF
Sbjct: 67 RNIRRVEEEVQERF 80
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 59.3 bits (137), Expect = 8e-08
Identities = 35/112 (31%), Positives = 58/112 (51%)
Frame = +1
Query: 283 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDG 462
L A A L L G RRA + +R IM +GA G E+++SGKL +RA+ K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEG 150
Query: 463 LMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEEATTRP 618
++ SG + + + +L+ G+ G++V I P + K +E+ + P
Sbjct: 151 IVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKINLKESPSVP 202
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 200 ELTSVVQKRFNIPEQSV 250
+L + +K F + +
Sbjct: 65 QLAQIFEKVFGLENPQI 81
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/96 (38%), Positives = 50/96 (52%)
Frame = +1
Query: 283 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDG 462
L A A L L G RRA + +R IM SGA G EV+VSGKL +RAK K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEG 150
Query: 463 LMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
+ SG + + + +L+ GV G++V I P
Sbjct: 151 TVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVITKP 186
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 200 ELTSVVQKRFNIPEQSV 250
+L V++K F + +
Sbjct: 65 QLAQVLEKFFGLENPQI 81
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 59.3 bits (137), Expect = 8e-08
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +1
Query: 343 RRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHV 522
RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD + +
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKA 172
Query: 523 LLRQGVLGIKVKIMLP 570
LL++GV G++V I+ P
Sbjct: 173 LLKRGVYGVEVVIVRP 188
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 20 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 199
K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 200 ELTSVVQKRFNIPEQSV 250
+L +++Q F + ++
Sbjct: 67 KLMTIMQTHFGLENVNI 83
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +1
Query: 331 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHS 510
G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G + G + + +
Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRA 175
Query: 511 TRHVLLRQGVLGIKVKI 561
HVLL+ G+ GI+V+I
Sbjct: 176 VVHVLLKPGIYGIEVRI 192
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/77 (24%), Positives = 42/77 (54%)
Frame = +2
Query: 23 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 202
+K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E
Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71
Query: 203 LTSVVQKRFNIPEQSVE 253
+++++ + + ++
Sbjct: 72 ISNILTTKLGVENPQID 88
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +1
Query: 331 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHS 510
G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G Q +
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEA 163
Query: 511 TRHVLLRQGVLGIKVKIMLP 570
VLL+ G+ ++V+++ P
Sbjct: 164 VIPVLLKPGIFSVRVRVLPP 183
Score = 41.5 bits (93), Expect = 0.017
Identities = 16/71 (22%), Positives = 40/71 (56%)
Frame = +2
Query: 23 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 202
++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG++++
Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62
Query: 203 LTSVVQKRFNI 235
L +++ +FN+
Sbjct: 63 LADILKSKFNL 73
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +1
Query: 343 RRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHV 522
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG + ++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYL 217
Query: 523 LLRQGVLGIKVKIM 564
++G LGI +KIM
Sbjct: 218 NKKRGTLGINIKIM 231
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +2
Query: 80 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 220
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 56 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 235
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 236 PEQSVE 253
V+
Sbjct: 76 KSPQVD 81
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 331 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQH 507
G A RRA ++ IME A G ++ +SGKLR R+ K G++ +G +
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAGHYADVIVLD 165
Query: 508 STRHVLLRQGVLGIKVKI 561
HV G++GI+++I
Sbjct: 166 DVVHVKTPMGLIGIRIRI 183
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/79 (24%), Positives = 45/79 (56%)
Frame = +2
Query: 17 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 196
K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 197 RELTSVVQKRFNIPEQSVE 253
+++T ++K++ I +E
Sbjct: 62 QQMTDTLEKKYGIETPQIE 80
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/90 (31%), Positives = 49/90 (54%)
Frame = +1
Query: 301 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSG 480
A+ + L G + R+A L +++GA+G + +SGK+ +RA+ KF+ G + +SG
Sbjct: 95 AKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSG 154
Query: 481 DPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
+P L+ G+LG+ VKI+ P
Sbjct: 155 EPGSKGMITGFSTAKLKVGILGVTVKILNP 184
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 49.6 bits (113), Expect = 6e-05
Identities = 31/107 (28%), Positives = 49/107 (45%)
Frame = +1
Query: 250 RMYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRC 429
R+ ++ L A A L L G RRA + + IM++GARGC +++SGK+
Sbjct: 83 RLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGKISG 142
Query: 430 QRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLP 570
R + KF G + G+ + + G +G V+IM P
Sbjct: 143 PRHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTVRIMRP 189
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 23 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 202
R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E
Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68
Query: 203 LTSVVQKRFNIPEQSVE 253
L ++ F + +E
Sbjct: 69 LQYRLKSDFKLENPRLE 85
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 48.0 bits (109), Expect = 2e-04
Identities = 29/97 (29%), Positives = 55/97 (56%)
Frame = -1
Query: 564 HDFDLDS*YSLSEKHMSGRVLT*SLTRVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGT 385
H+ D D+ +LS +H+S + + ++RVDHE++ L G+ ++Q +N T T
Sbjct: 82 HNLDSDTQNTLSHQHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLST 141
Query: 384 RFHDETENTIASTTYSETSDKLVS*RFGLGDSAKATS 274
H ++++T+ +++ +T +L FGL DS+ TS
Sbjct: 142 SSHGKSQHTVGGSSHWQTVQQLGFQGFGL-DSSGQTS 177
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 46.4 bits (105), Expect = 6e-04
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +1
Query: 337 AVRRACYGVLRFIMESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHSTR 516
A RR L IM +GA G E+V++G+L QR K+ +F G + +G Q +
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFN 167
Query: 517 HVLLRQGVLGIKVKIMLP 570
L+ GV GI V I+ P
Sbjct: 168 IAYLKPGVAGIHVTILKP 185
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 41.1 bits (92), Expect = 0.023
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Frame = +1
Query: 337 AVRRACYGVLRFIMESGARGCEVVVSGKL-RCQRAKSMKFVDGLMIHSGDPCQ*LR---Q 504
A RRA + +MESGARG +V++SG+L ++A++ K ++G + P LR
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRV-----PLHTLRADID 184
Query: 505 HSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEEATTRPHPGNRAQGR 645
+ T G+LGIKV L ++ + G E RP +R + R
Sbjct: 185 YGTALARTTYGILGIKV---LVFNGEVIGGKTETFARPQRRDRDERR 228
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 38.7 bits (86), Expect = 0.12
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +1
Query: 283 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLR-CQRAKSMKFVD 459
L A AE++ +L G +A RRA + M GA G ++ VSG+L + A+S F +
Sbjct: 110 LDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKE 169
Query: 460 GLMIHSGDPCQ*LR---QHSTRHVLLRQGVLGIKVKI 561
G P LR ++ L + G+LGIKV I
Sbjct: 170 G-----RTPLHTLRADIDYALAEALTKVGLLGIKVWI 201
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 29 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 148
FVGDG F+ + EFL +L E+ G++V +TP+ + + +
Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 297 PGRISKIQAYRRSRCTSCLLWCSPFHH 377
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_Q980D5 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus solfataricus|Rep: Putative uncharacterized
protein - Sulfolobus solfataricus
Length = 496
Score = 33.9 bits (74), Expect = 3.5
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = -1
Query: 435 TLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKLVS*RFGLGDSAKATSSHLFSI 256
T TT + TTT T T ++ STT S +S S + +T+S +
Sbjct: 394 TTTTTSSTTTTSTTTSTTSTTSTSSSTTSTTTSSSSTTTTSSSITSSSTTSSTTSSTSTT 453
Query: 255 HSTDCSGMLNRFCTTEVSSRILRPFS-PSTLCVLVAIIMISER 130
T S T+ VS+ ++ + + V+VA++++ R
Sbjct: 454 TPTSTSSSTTSVTTSGVSTSVIIGIAIVVIIIVIVAVVLLRRR 496
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.5 bits (73), Expect = 4.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 357 WCSPFHHGIWCPWL*SCCIWQAALSTCQINEVCRW 461
W P G WC W C IW S C+ RW
Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 33.5 bits (73), Expect = 4.6
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = +1
Query: 334 LAVRRACYGVLRFIMESGARGCEVVVSGKLR-CQRAKSMKFVDGLMIHSGDPCQ*LR--- 501
+A RRA G ++ + +GA+G +VSG+L A+ ++ +G + P LR
Sbjct: 135 VAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTV-----PLHTLRADI 189
Query: 502 QHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE-----ATTRPHPGNRAQGRAR 651
+S + G LGIK I + G+ +E A R NR +G +R
Sbjct: 190 DYSWDEAMTSYGNLGIKTWIYRGDAENGQFIKDEDVAAAANNRGRGNNRGRGNSR 244
>UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g06190.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 295
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 208 SELTDSASFLSEHTLCPGGHNNDLRADGSD 119
SEL + + LSEH+L GH +L ADG D
Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284
>UniRef50_A2Y1D8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 137
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 303 GLGDSAKATSSHLFSIHSTDCSGMLNRFCTTEVSS 199
GLG S T++HL +I S+ C G L R C+ V +
Sbjct: 37 GLGYSQLLTTAHLGAISSSSCGGRLGRQCSAAVGA 71
>UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1;
n=9; Endopterygota|Rep: Drosophila dodeca-satellite
protein 1 - Drosophila melanogaster (Fruit fly)
Length = 1301
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 122 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVE 253
T ++ + + +LG+ G+R+RE+ V R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>UniRef50_Q12215 Cluster: Cell wall integrity and stress response
component 3 precursor; n=2; Saccharomyces
cerevisiae|Rep: Cell wall integrity and stress response
component 3 precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 556
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -1
Query: 399 TTTGTRFHDETENTIASTTYSETSDKLVS*RFGLGDSAKATSSHLFSIHSTDCSGMLNRF 220
+TT + T +T +STT S TS S S ++++ +FS+ S+ S L+
Sbjct: 214 STTSSSTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSIFSVTSSSSSITLSSS 273
Query: 219 CTTEVSSRILRPFS 178
T V SR P S
Sbjct: 274 EHTTVDSRTSSPSS 287
>UniRef50_UPI0000F1F8B1 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 499
Score = 32.7 bits (71), Expect = 8.0
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 21 SENLLEMGFSRQNSMS--SSLGSWPRTATPAW-KCGSLPSARRSLLWPPGHRVCSERKDA 191
S ++ SR NS+ SS R + W +C L RR+LLW PG VC R+D
Sbjct: 218 SVQFMDYKASRSNSVETHSSERRLQRNPSSEWCECEDLLLRRRALLWRPGGSVC-VREDE 276
Query: 192 ESVSS 206
S S
Sbjct: 277 SSPDS 281
>UniRef50_Q9VWU0 Cluster: CG15046-PA; n=2; Sophophora|Rep:
CG15046-PA - Drosophila melanogaster (Fruit fly)
Length = 494
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 6 TIFQRSENLLEMGFSRQNSMSSSLGSWPRTATPAWKCGSLPS 131
T QRS +L+ +G+ + L P P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,328,060
Number of Sequences: 1657284
Number of extensions: 15201295
Number of successful extensions: 47535
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 45232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47502
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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