Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30654
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 204 2e-52
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 204 2e-52
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 204 2e-52
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 204 2e-52
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 204 2e-52
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 204 2e-52
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 204 2e-52
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 204 2e-52
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 204 2e-52
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 204 2e-52
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 204 2e-52
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 204 2e-52
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 204 2e-52
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 203 5e-52
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 202 7e-52
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 170 3e-42
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 146 6e-35
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 146 6e-35
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 124 3e-28
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 156 bits (378), Expect = 7e-38
Identities = 104/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 85 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 144
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 145 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 201
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 124 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 178
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 179 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 218
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 85 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 144
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 145 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 201
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 124 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 178
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 179 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 218
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 117
Score = 39.1 bits (87), Expect = 0.014
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 587 RTGPKKPQPDHILVTEPKDEPVP 655
+ GPKKP PDH+ + EPKDE +P
Sbjct: 112 KIGPKKPLPDHVSIVEPKDEILP 134
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 204 bits (499), Expect = 2e-52
Identities = 99/117 (84%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (381), Expect = 3e-38
Identities = 105/220 (47%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVECMLKR-----WLLVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE ++ +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 203 bits (495), Expect = 5e-52
Identities = 98/117 (83%), Positives = 105/117 (89%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 157 bits (380), Expect = 4e-38
Identities = 107/220 (48%), Positives = 126/220 (57%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVEC----MLKRWL-LVAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF PE SVE + R L +A A S R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 202 bits (494), Expect = 7e-52
Identities = 98/117 (83%), Positives = 104/117 (88%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 86 LYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 145
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKIMLPWDQQGKNGPEE 603
RAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKVKIMLPWD GK GP++
Sbjct: 146 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Score = 150 bits (363), Expect = 5e-36
Identities = 104/220 (47%), Positives = 123/220 (55%), Gaps = 5/220 (2%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIP----EQSVECMLKRWLL-VAFALSPRPNL*DTSLSEVSLYVVLA 355
RIRELT+VVQKRF P E E + R L +A A R L + Y VL
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLR 124
Query: 356 MVFSVSSWNLVPVVVKLLYLASCVVNVPNQ*SL*MDS*STLETLVNDYVNTLPDMCFSDK 535
+ S VVV ++ L + S VN YV+T +
Sbjct: 125 FIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP----VNYYVDTAVRHVLLRQ 179
Query: 536 EY*ESRSKSCCRGTSKARTGPKKPQPDHILVTEPKDEPVP 655
+ K + GPKKP PDH+ + EPKDE +P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 170 bits (414), Expect = 3e-42
Identities = 84/103 (81%), Positives = 89/103 (86%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRCQ 432
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLR Q
Sbjct: 30 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 89
Query: 433 RAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKVKI 561
RAKSMKFVDGLMIHSGDP + RHVLLRQGV V +
Sbjct: 90 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVWDTSVHL 132
Score = 41.5 bits (93), Expect = 0.003
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 182 KGRRIRELTSVVQKRFNIPEQSVE 253
+GRRIRELT+VVQKRF PE SVE
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVE 29
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 146 bits (354), Expect = 6e-35
Identities = 71/81 (87%), Positives = 76/81 (93%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVE 253
RIRELT+VVQKRF PE SVE
Sbjct: 65 RIRELTAVVQKRFGFPEGSVE 85
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 146 bits (354), Expect = 6e-35
Identities = 71/81 (87%), Positives = 76/81 (93%)
Frame = +2
Query: 11 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 190
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 191 RIRELTSVVQKRFNIPEQSVE 253
RIRELT+VVQKRF PE SVE
Sbjct: 65 RIRELTAVVQKRFGFPEGSVE 85
Score = 64.9 bits (151), Expect = 2e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 253 MYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 348
+YAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 86 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 124 bits (299), Expect = 3e-28
Identities = 60/76 (78%), Positives = 64/76 (84%)
Frame = +1
Query: 376 MESGARGCEVVVSGKLRCQRAKSMKFVDGLMIHSGDPCQ*LRQHSTRHVLLRQGVLGIKV 555
MESGA+GCEVVVSGKLR QRAKSMKFVDGLMIHSGDP + RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 556 KIMLPWDQQGKNGPEE 603
KIMLPWD GK GP++
Sbjct: 61 KIMLPWDPTGKIGPKK 76
Score = 39.1 bits (87), Expect = 0.014
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 587 RTGPKKPQPDHILVTEPKDEPVP 655
+ GPKKP PDH+ + EPKDE +P
Sbjct: 71 KIGPKKPLPDHVSIVEPKDEILP 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,724,325
Number of Sequences: 237096
Number of extensions: 2467518
Number of successful extensions: 9995
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9995
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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