Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30653
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 263 WDPVSSNLPSKLLSL 219
           W P S NLP+ LL L
Sbjct: 461 WVPASDNLPTLLLEL 475


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 359
           G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 60  GVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 255 RQLEFTEQVVIFGHSTLTLKYLDEYSGLV 169
           +Q    +QV  F HS  ++ +L E  GLV
Sbjct: 361 KQYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 509 SMKSTMEDEKLKEKISDSD 565
           S+ S  EDE+++ ++SD D
Sbjct: 18  SLLSKKEDEEVEHRLSDRD 36


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 562 RVRDLFLELLIL 527
           RV+DLFLE ++L
Sbjct: 581 RVKDLFLEAVLL 592


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 438 KYRNEDDKQKETIQAKNALESY 503
           ++ N D  Q+ + +  NA ESY
Sbjct: 365 QFNNSDFVQRNSTEFDNATESY 386


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,974
Number of Sequences: 336
Number of extensions: 2403
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)