Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30653
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 145 2e-35
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 136 1e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 127 5e-30
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 127 5e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 123 1e-28
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 121 4e-28
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 120 6e-28
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 120 6e-28
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 118 2e-27
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 101 5e-22
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 57 8e-09
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 40 0.001
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 31 0.82
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 30 1.1
AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 30 1.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 1.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 1.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 1.9
Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 3.3
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 4.4
Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical p... 28 5.8
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 5.8
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 28 5.8
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 27 7.7
AC006791-7|AAF60740.2| 448|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 145 bits (352), Expect = 2e-35
Identities = 68/83 (81%), Positives = 76/83 (91%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K+NKITITNDKGRLSK++IERMVNEA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEA 523
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
EKY+ +D+ QK+ I AKN LESY
Sbjct: 524 EKYKADDEAQKDRIGAKNGLESY 546
Score = 110 bits (265), Expect = 6e-25
Identities = 57/86 (66%), Positives = 59/86 (68%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
AIL GDKSE VQD GIETAGGVMT LIKRN YSDNQPG
Sbjct: 379 AILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPG 438
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTG 258
VLIQV+EGERAMTKDNNLLGKFEL+G
Sbjct: 439 VLIQVYEGERAMTKDNNLLGKFELSG 464
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +2
Query: 509 SMKSTMEDEKLKEKISDSDKQTILDKCND 595
++K T+EDEKLK+KIS DK+ I DKC++
Sbjct: 549 NLKQTIEDEKLKDKISPEDKKKIEDKCDE 577
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 136 bits (328), Expect = 1e-32
Identities = 64/83 (77%), Positives = 72/83 (86%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K +ITITNDK R SK++IERMVNEA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDKDRFSKDDIERMVNEA 523
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
EKY+ +D+ QK+ I AKN LESY
Sbjct: 524 EKYKADDEAQKDRIGAKNGLESY 546
Score = 110 bits (265), Expect = 6e-25
Identities = 57/86 (66%), Positives = 59/86 (68%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
AIL GDKSE VQD GIETAGGVMT LIKRN YSDNQPG
Sbjct: 379 AILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPG 438
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTG 258
VLIQV+EGERAMTKDNNLLGKFEL+G
Sbjct: 439 VLIQVYEGERAMTKDNNLLGKFELSG 464
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +2
Query: 509 SMKSTMEDEKLKEKISDSDKQTILDKCND 595
++K T+EDEKLK+KIS DK+ I DKC++
Sbjct: 549 NLKQTIEDEKLKDKISPEDKKKIEDKCDE 577
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 127 bits (307), Expect = 5e-30
Identities = 57/83 (68%), Positives = 73/83 (87%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K N+ITI N+KGRL++ +I+RMV+EA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEA 523
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
+++ ED +Q+E +QA+N LE+Y
Sbjct: 524 KQFEKEDGEQRERVQARNQLEAY 546
Score = 89.0 bits (211), Expect = 2e-18
Identities = 45/86 (52%), Positives = 53/86 (61%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
A+L G K E ++D GIETAGGVMT LI RN Y+DNQPG
Sbjct: 379 AVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPG 438
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTG 258
V IQV+EGERAMT+DN+ LG FEL+G
Sbjct: 439 VSIQVYEGERAMTRDNHRLGTFELSG 464
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 127 bits (307), Expect = 5e-30
Identities = 57/83 (68%), Positives = 73/83 (87%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K N+ITI N+KGRL++ +I+RMV+EA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEA 523
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
+++ ED +Q+E +QA+N LE+Y
Sbjct: 524 KQFEKEDGEQRERVQARNQLEAY 546
Score = 89.0 bits (211), Expect = 2e-18
Identities = 45/86 (52%), Positives = 53/86 (61%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
A+L G K E ++D GIETAGGVMT LI RN Y+DNQPG
Sbjct: 379 AVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPG 438
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTG 258
V IQV+EGERAMT+DN+ LG FEL+G
Sbjct: 439 VSIQVYEGERAMTRDNHRLGTFELSG 464
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 123 bits (296), Expect = 1e-28
Identities = 54/83 (65%), Positives = 71/83 (85%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQ++VTFDIDANGILNVSA +KST + N+ITI N+KGRLS+ +I+RMVNEA
Sbjct: 464 GIPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGRLSQADIDRMVNEA 523
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
+++ ED Q++ I ++N LE+Y
Sbjct: 524 KQFEREDAAQRDRISSRNQLEAY 546
Score = 89.4 bits (212), Expect = 2e-18
Identities = 45/86 (52%), Positives = 53/86 (61%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
A+L G K + ++D GIETAGGVMT LI RN Y+DNQPG
Sbjct: 379 AVLSGVKDDTIKDVLLVDVVPLSHGIETAGGVMTNLIDRNTRIPAKASKTFTTYADNQPG 438
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTG 258
V IQV+EGERAMT+DN+ LG FELTG
Sbjct: 439 VSIQVYEGERAMTRDNHRLGTFELTG 464
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 121 bits (291), Expect = 4e-28
Identities = 54/83 (65%), Positives = 69/83 (83%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
G+PPAPRGVPQIEVTF+ID NGIL+V+A +K T +NKITITND+ RLS E+IERM+N+A
Sbjct: 491 GLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDA 550
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
EK+ +D K K+ +A+N LESY
Sbjct: 551 EKFAEDDKKVKDKAEARNELESY 573
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1
Query: 73 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 252
GIET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+L
Sbjct: 430 GIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDL 489
Query: 253 TG 258
TG
Sbjct: 490 TG 491
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 120 bits (290), Expect = 6e-28
Identities = 53/83 (63%), Positives = 69/83 (83%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQIEVTF+ID NGIL+VSA +K T +NK+TITND RLS E+IERM+N+A
Sbjct: 119 GIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDA 178
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
+K+ +D QKE ++++N LE+Y
Sbjct: 179 DKFAADDQAQKEKVESRNELEAY 201
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +1
Query: 73 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 252
GIET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++
Sbjct: 58 GIETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDV 117
Query: 253 TG 258
TG
Sbjct: 118 TG 119
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 120 bits (290), Expect = 6e-28
Identities = 53/83 (63%), Positives = 69/83 (83%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQIEVTF+ID NGIL+VSA +K T +NK+TITND RLS E+IERM+N+A
Sbjct: 488 GIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDA 547
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
+K+ +D QKE ++++N LE+Y
Sbjct: 548 DKFAADDQAQKEKVESRNELEAY 570
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +1
Query: 73 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 252
GIET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++
Sbjct: 427 GIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDV 486
Query: 253 TG 258
TG
Sbjct: 487 TG 488
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 118 bits (285), Expect = 2e-27
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
G+PPAPRGVPQIEVTF+ID NGIL+V+A +K T +NKITITND+ RLS E+IE M+N+A
Sbjct: 491 GLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIEAMINDA 550
Query: 435 EKYRNEDDKQKETIQAKNALESY 503
EK+ +D K K+ +A+N LESY
Sbjct: 551 EKFAEDDKKVKDKAEARNELESY 573
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1
Query: 73 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 252
GIET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+L
Sbjct: 430 GIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDL 489
Query: 253 TG 258
TG
Sbjct: 490 TG 491
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 101 bits (241), Expect = 5e-22
Identities = 49/81 (60%), Positives = 60/81 (74%)
Frame = +3
Query: 255 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 434
GIPPAPRGVPQ+EVTFDIDANGI+NVSA ++ T KE +I I G LSK++IE M+ EA
Sbjct: 486 GIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVI-QSSGGLSKDQIENMIKEA 544
Query: 435 EKYRNEDDKQKETIQAKNALE 497
EK ED K+KE ++ N E
Sbjct: 545 EKNAAEDAKRKELVEVINQAE 565
Score = 57.2 bits (132), Expect = 8e-09
Identities = 35/86 (40%), Positives = 41/86 (47%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
A+L GD V D GIET GG+MT LI RN +D Q
Sbjct: 405 AVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQ 460
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTG 258
V I+VF+GER M N LLG+F L G
Sbjct: 461 VQIKVFQGEREMATSNKLLGQFSLVG 486
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 57.2 bits (132), Expect = 8e-09
Identities = 35/86 (40%), Positives = 41/86 (47%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
A+L GD V D GIET GG+MT LI RN +D Q
Sbjct: 405 AVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQ 460
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTG 258
V I+VF+GER M N LLG+F L G
Sbjct: 461 VQIKVFQGEREMATSNKLLGQFSLVG 486
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein
T24H7.2 protein.
Length = 925
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 339 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 500
+++ K KIT +D + K +I+ +V EAEK + E DK+KE K A ES
Sbjct: 860 VDRFMKKMKKITTLDDLAKDGKIDIDTIVEEAEKKKAEQDKKKEKKSTKKANES 913
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/91 (28%), Positives = 38/91 (41%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
A+L G +EEVQD G++ M+ LIK+ D Q
Sbjct: 376 AVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTS 433
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTGSHRRR 273
+ + V+EGER + N LG+ L +RR
Sbjct: 434 INVPVYEGERVLCSHNRQLGEISLPIQPKRR 464
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/91 (28%), Positives = 38/91 (41%)
Frame = +1
Query: 1 AILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 180
A+L G +EEVQD G++ M+ LIK+ D Q
Sbjct: 376 AVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTS 433
Query: 181 VLIQVFEGERAMTKDNNLLGKFELTGSHRRR 273
+ + V+EGER + N LG+ L +RR
Sbjct: 434 INVPVYEGERVLCSHNRQLGEISLPIQPKRR 464
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 342 EKSTNKENKITITNDKGRLSKEE-IERMVNEAEKYRNEDDKQKETIQAKNALE 497
EK K+ +K R+ KEE I++ V EAEK + E+ +++ KN E
Sbjct: 251 EKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREE 303
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 342 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR----NEDDKQKETIQAKNALESYCL 509
E N E +T + R KEE++ + E+Y+ NE D +KE + N L + CL
Sbjct: 38 EMCQNYEVNLTALQENERKLKEEVKAAMELNERYQLDLSNERDYRKELEKKMNELSTNCL 97
>AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily
assigned gene nameprotein 63 protein.
Length = 604
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 384 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 485
D+ L +EEIER+ E ++ +NE K + +QA+
Sbjct: 23 DESFLDEEEIERIKEELQRVQNEKKKHIQRMQAR 56
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 300 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 467
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1657 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1716
Query: 468 ETIQAKNALES 500
+ + + ALES
Sbjct: 1717 DAEEERRALES 1727
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 300 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 467
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1730 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1789
Query: 468 ETIQAKNALES 500
+ + + ALES
Sbjct: 1790 DAEEERRALES 1800
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 300 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 467
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1730 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1789
Query: 468 ETIQAKNALES 500
+ + + ALES
Sbjct: 1790 DAEEERRALES 1800
>Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical
protein T10G3.1 protein.
Length = 318
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 279 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY----R 446
VP+ E DID + + A E + N+E + +K +LS E IE++ E Y R
Sbjct: 185 VPKFEG--DIDEDDLPPPPATEDTENEEPEEECLANKEKLSDEVIEKLQAETTMYYRLVR 242
Query: 447 NEDDKQKE 470
+++QKE
Sbjct: 243 QRNEQQKE 250
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 342 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 485
EK +E K ++K KE+ + N+ +K +++DDK++E+ + K
Sbjct: 77 EKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDK 124
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 321 ILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK---QKETIQAKNA 491
+++ +A+E + D+ +K E+E + EAEK ++E ++ +E + A N
Sbjct: 143 LMDEAALEGEKGNVDAAQTAVDRADKAKVEVEELTQEAEKLKSEKERAINMEENVTAGNR 202
Query: 492 LESYC 506
C
Sbjct: 203 QMQVC 207
>Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical
protein Y57G11C.52 protein.
Length = 96
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 372 TITNDKGRLSKEEIERMVNEAEKYR 446
T N G LSKEE++ M++E+ K R
Sbjct: 70 TCVNGLGCLSKEEVQMMIDESNKPR 94
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 375 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 500
+ + G LSKEE + + + +NE+ + +E I+ KNA S
Sbjct: 1 MATESGGLSKEEFLLVQEQLLQLKNENYELREEIKKKNAAAS 42
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 339 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 461
++ TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 284 LKDGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 324
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 339 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 461
++ TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 340 LKDGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 380
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 351 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDD 458
TN + G L+ EEIE +V E Y EDD
Sbjct: 37 TNPAGTDNVLGKAGYLATEEIEGLVRYDEYYSEEDD 72
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 402 KEEIERMVNEAEKYRNEDDKQKETI 476
KEEIE + + EK NE+ KQK T+
Sbjct: 140 KEEIEAIRRQLEKEVNEEVKQKATL 164
>AC006791-7|AAF60740.2| 448|Caenorhabditis elegans Hypothetical
protein Y4C6A.1 protein.
Length = 448
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 339 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 461
++ +N E I +T LSK +I+ M+NEA RN + K
Sbjct: 218 LKDGSNVEVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,362,461
Number of Sequences: 27780
Number of extensions: 237992
Number of successful extensions: 1260
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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