Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30653
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.75 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   1.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.3  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   4.0  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   4.0  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   4.0  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   4.0  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   4.0  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   4.0  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 96  HDHTHQA*HYHPHITDSDIHH 158
           H H H    YHPH   S  HH
Sbjct: 317 HPHQHHPSQYHPH-RGSSPHH 336



 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 277 PRGAGGIPSARIYRAS 230
           PRG GG+P++ I  A+
Sbjct: 399 PRGPGGVPTSVIQAAT 414


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 57  NTPFPRY*DCWRCHDHTHQA*HYHPHITDSDIHH 158
           +TP P +      H H H   H+H H   +  HH
Sbjct: 410 STPGPHHHTMGHGHSHIHATPHHH-HSHAATPHH 442


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 161 TLITNPEYSSKYLR 202
           T I N  YSSKY+R
Sbjct: 199 TYIVNTNYSSKYMR 212


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 HYQRQRSSLQGRDRAY 421
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 HYQRQRSSLQGRDRAY 421
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 HYQRQRSSLQGRDRAY 421
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 HYQRQRSSLQGRDRAY 421
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 HYQRQRSSLQGRDRAY 421
           HY R+RS  + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 HYQRQRSSLQGRDRAY 421
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 314 QRYPQRFRYREVHQ-QGEQDHHYQRQRSSLQGRDR 415
           +RY  R R RE +  + E+++   R+RS  + RDR
Sbjct: 270 KRY-SRSREREQNSYKNEREYRKYRERSKERSRDR 303


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 515 KSTMEDEKLKEKISDSDKQTILDKCN 592
           + +++ EK+K  +S    +T+  KCN
Sbjct: 331 RCSVKREKIKISVSYPSTETLNTKCN 356


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 195 YLDEYSGLVIRVGGECLSLLCGDGSVTLDECG 100
           Y D  + L +     C S +   G V+  ECG
Sbjct: 143 YYDGGANLNLNGTVNCTSSIASSGVVSAGECG 174


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 116  VTLPSPHNRLRHSPP 160
            +T PSP  R R++PP
Sbjct: 986  MTDPSPFKRGRYTPP 1000


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,557
Number of Sequences: 438
Number of extensions: 3261
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)