Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30651
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.37 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    24   1.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    24   1.1  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   1.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.0  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 283 KYWVQSCGPNSRRVNPLPARTLVW 212
           +YW+Q   PN++ +  +PA    W
Sbjct: 273 RYWLQKGAPNNKLILGIPAYGRAW 296


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 466 SINASSTACS*ISCRPITEDEKNFKAYQYLIGARSI 573
           S+N  +T  +  + + +TE EK F   +YL  AR I
Sbjct: 249 SLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRARRI 284


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 466 SINASSTACS*ISCRPITEDEKNFKAYQYLIGARSI 573
           S+N  +T  +  + + +TE EK F   +YL  AR I
Sbjct: 38  SLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRARRI 73


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 466 SINASSTACS*ISCRPITEDEKNFKAYQYLIGARSI 573
           S+N  +T  +  + + +TE EK F   +YL  AR I
Sbjct: 38  SLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRARRI 73


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 476 PVQQPAPKSVADLSLKMKR 532
           P Q P P+SV  LSL ++R
Sbjct: 218 PSQSPEPESVRPLSLVVRR 236


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 193 DAQLFGTILKYAPVEDSLFVN*GRRIEPSICPN 291
           D Q  GTI    P + ++F+  G   + S+CP+
Sbjct: 217 DNQCSGTIDWALPNKRTVFIRKGGTAKASMCPS 249


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -2

Query: 442 TFFFIGLTLQHLFAFREQYETRSVFLYSLNIDL 344
           T+F   ++  H+FA  E    +++ L ++N+ +
Sbjct: 189 TYFLGNMSFAHIFALVEYDIFKALVLQTINLQI 221


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -2

Query: 442 TFFFIGLTLQHLFAFREQYETRSVFLYSLNIDL 344
           T+F   ++  H+FA  E    +++ L ++N+ +
Sbjct: 189 TYFLGNMSFAHIFALVEYDIFKALVLQTINLQI 221


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +3

Query: 51   HFHKDWQRFVKTWFN 95
            H H DW     TW++
Sbjct: 1030 HMHPDWTTKPSTWWS 1044



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 310  IYSNSNRSGKYWVQSCGPNSRRVNPLP 230
            ++ N+N S  YW+    P  + V  +P
Sbjct: 1615 VFYNANFSINYWISEGVPRRKIVMGMP 1641


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 143 SFLYSILLSAVSSSW 99
           SF+ S+L S V+S W
Sbjct: 102 SFMTSVLFSQVASRW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,077
Number of Sequences: 336
Number of extensions: 2956
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)