Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30651
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 102 1e-21
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 102 1e-21
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 102 1e-21
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 102 1e-21
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 102 1e-21
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 101 1e-21
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 38 0.036
AK057255-1|BAB71398.1| 260|Homo sapiens protein ( Homo sapiens ... 30 7.1
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 102 bits (244), Expect = 1e-21
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 101 bits (243), Expect = 1e-21
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 AGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEE 439
AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE
Sbjct: 84 AGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEE 143
Query: 440 RKLATQLRGPLMPVQQPAPKSVADLSLKMKRTSK 541
KLATQL GP+MPV+ K A + + ++ K
Sbjct: 144 LKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 99.1 bits (236), Expect = 1e-20
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +3
Query: 30 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 209
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 210 YHTKVRAGRGFTLREL 257
YHTKVRAGRGF+L EL
Sbjct: 66 YHTKVRAGRGFSLEEL 81
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRA 196
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 37.5 bits (83), Expect = 0.036
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 508 RPITEDEKNFKAYQYLIGARSIAKLVGIRA 597
R ITE+EKNFKA+ L AR+ A+L GIRA
Sbjct: 24 RVITEEEKNFKAFASLRMARANARLFGIRA 53
>AK057255-1|BAB71398.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ32693 fis, clone TESTI2000253, weakly similar to
Homo sapiens A1U mRNA. ).
Length = 260
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/64 (20%), Positives = 32/64 (50%)
Frame = +2
Query: 329 SVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVA 508
++ S+++ Q +EY+ + ++ LKG+ + + ++Q+ G +M + P A
Sbjct: 167 ALPSIELTQQLQEEYKGATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 226
Query: 509 DLSL 520
+ L
Sbjct: 227 QIML 230
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,102,578
Number of Sequences: 237096
Number of extensions: 1764495
Number of successful extensions: 3548
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3518
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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