Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30650
(802 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 149 3e-36
SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 1e-26
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_53807| Best HMM Match : MCM (HMM E-Value=0) 111 6e-25
SB_52330| Best HMM Match : MCM (HMM E-Value=0) 109 3e-24
SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_6119| Best HMM Match : MCM (HMM E-Value=3.6e-13) 83 3e-16
SB_55518| Best HMM Match : MCM (HMM E-Value=8.6e-19) 76 4e-14
SB_12515| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 31 1.4
SB_52559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_17646| Best HMM Match : DUF1521 (HMM E-Value=0.048) 30 2.5
SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33) 29 4.4
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_22386| Best HMM Match : HLH (HMM E-Value=1.6e-13) 29 5.8
SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_15006| Best HMM Match : Stig1 (HMM E-Value=2) 28 7.7
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 149 bits (361), Expect = 3e-36
Identities = 71/80 (88%), Positives = 76/80 (95%)
Frame = +2
Query: 257 RTAIHEVMEQQTISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSR 436
RTAIHEVMEQQT+SIAKAGIMT LNARVSILAAANPAYGRYNPK++ EQNIQLPAALLSR
Sbjct: 893 RTAIHEVMEQQTVSIAKAGIMTTLNARVSILAAANPAYGRYNPKKSAEQNIQLPAALLSR 952
Query: 437 FDLLWLIQDKPNREKDLELA 496
FDLLWLIQDKP++E DL LA
Sbjct: 953 FDLLWLIQDKPDKENDLRLA 972
Score = 88.6 bits (210), Expect = 5e-18
Identities = 40/65 (61%), Positives = 48/65 (73%)
Frame = +3
Query: 510 VHQHSTQPPSSVRALSMKLVRRYVALTKRKEPAVPRALADYIVSSYVELRREARNARDVT 689
VHQHS PPS L M L+RRY+A K K+P VP L+DYIVS+YVE+R++ARN D T
Sbjct: 978 VHQHSAHPPSHYDPLDMNLMRRYIAACKEKQPIVPGELSDYIVSAYVEMRKDARNNHDTT 1037
Query: 690 FTSAR 704
FTSAR
Sbjct: 1038 FTSAR 1042
Score = 64.5 bits (150), Expect = 1e-10
Identities = 44/83 (53%), Positives = 49/83 (59%)
Frame = +3
Query: 3 KIRGNINICLMGDPGVAKSQLLNYIDRLAPRSQYTTGRGSSGVGLTAAVLKDPFTGEMML 182
KIRGNINI LMGDPGVAKSQ+L+YIDRLAPR +G A VL D
Sbjct: 837 KIRGNINILLMGDPGVAKSQMLSYIDRLAPR------KGG------ALVLAD-------- 876
Query: 183 EGGALVLADQGVCCIDEFDKMAE 251
+GVCCIDEFDKM +
Sbjct: 877 ---------KGVCCIDEFDKMMD 890
>SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 117 bits (281), Expect = 1e-26
Identities = 55/83 (66%), Positives = 67/83 (80%)
Frame = +3
Query: 3 KIRGNINICLMGDPGVAKSQLLNYIDRLAPRSQYTTGRGSSGVGLTAAVLKDPFTGEMML 182
++RG+INI L+GDP AKSQ+L Y+ APR+ TTGRGSSGVGLTAAV DP TG+ L
Sbjct: 123 RLRGDINILLIGDPSTAKSQMLRYVLHSAPRAIPTTGRGSSGVGLTAAVTTDPETGDRRL 182
Query: 183 EGGALVLADQGVCCIDEFDKMAE 251
E GA+VLAD+GV CIDEFDKM++
Sbjct: 183 EAGAMVLADRGVVCIDEFDKMSD 205
Score = 85.0 bits (201), Expect = 6e-17
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +2
Query: 257 RTAIHEVMEQQTISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSR 436
RTAIHEVMEQ ++I+KAGI LNAR S+LAAANP +GRY+ + NI + +LLSR
Sbjct: 208 RTAIHEVMEQGRVTISKAGIHAKLNARCSVLAAANPVFGRYDEFKNPMDNIGMQDSLLSR 267
Query: 437 FDLLWLIQDKPNREKDLELA 496
FDLL+++ D+ + + D ++
Sbjct: 268 FDLLFIVLDQMDPDNDRRIS 287
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 552 LSMKLVRRYVALTKRKEPAVPRALADYIVSSYVELRREARNARD 683
+SM +++Y+ + K +PA+ + AD I +Y ELR + D
Sbjct: 352 VSMAFMKKYIHVAKAIKPALTKPAADLISKAYSELRDQENIGND 395
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 113 bits (271), Expect = 2e-25
Identities = 48/82 (58%), Positives = 67/82 (81%)
Frame = +3
Query: 9 RGNINICLMGDPGVAKSQLLNYIDRLAPRSQYTTGRGSSGVGLTAAVLKDPFTGEMMLEG 188
RG+IN+ L+GDPG AKSQLL ++++++P YT+G+GSS GLTA+V++DP + ++EG
Sbjct: 368 RGDINVLLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSAAGLTASVMRDPVSRNFVMEG 427
Query: 189 GALVLADQGVCCIDEFDKMAEN 254
GA+VLAD GV CIDEFDKM E+
Sbjct: 428 GAMVLADGGVVCIDEFDKMRED 449
Score = 75.4 bits (177), Expect = 5e-14
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 17/99 (17%)
Frame = +2
Query: 251 EHRTAIHEVMEQQTISIAKAGIMTCLNARVSILAAANPAYGRYNPKR------TIEQ--- 403
+ R AIHE MEQQTISIAKAGI T LN+R ++LAAAN +GR++ + ++ Q
Sbjct: 449 DDRVAIHEAMEQQTISIAKAGITTTLNSRCAVLAAANSVFGRWDDTKGDQVCPSVTQLTY 508
Query: 404 --------NIQLPAALLSRFDLLWLIQDKPNREKDLELA 496
NI +LSRFD +++++D+ N+ KD+ LA
Sbjct: 509 YYRAIAGHNIDFMPTILSRFDTIFIVKDEHNQAKDIHLA 547
>SB_53807| Best HMM Match : MCM (HMM E-Value=0)
Length = 789
Score = 111 bits (267), Expect = 6e-25
Identities = 51/80 (63%), Positives = 63/80 (78%)
Frame = +3
Query: 3 KIRGNINICLMGDPGVAKSQLLNYIDRLAPRSQYTTGRGSSGVGLTAAVLKDPFTGEMML 182
KIRG+IN+ L GDPG AKSQ L Y+++ APR+ +TTG+G+S VGLTA V + P T E L
Sbjct: 434 KIRGDINVLLCGDPGTAKSQFLKYVEKTAPRAVFTTGQGASAVGLTAYVQRHPVTKEWTL 493
Query: 183 EGGALVLADQGVCCIDEFDK 242
E GALVLAD+G+C IDEFDK
Sbjct: 494 EAGALVLADKGMCLIDEFDK 513
Score = 54.8 bits (126), Expect = 8e-08
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2
Query: 332 ARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSRFDLLWLIQDKPNREKDLELA 496
AR SILAAANP GRY+P T +N+ L +LSRFD+L +++D + +D LA
Sbjct: 514 ARCSILAAANPIGGRYDPSLTFAENVDLTEPILSRFDILCVVRDTVDAIQDELLA 568
>SB_52330| Best HMM Match : MCM (HMM E-Value=0)
Length = 368
Score = 109 bits (261), Expect = 3e-24
Identities = 46/80 (57%), Positives = 63/80 (78%)
Frame = +3
Query: 6 IRGNINICLMGDPGVAKSQLLNYIDRLAPRSQYTTGRGSSGVGLTAAVLKDPFTGEMMLE 185
+RG+INIC++GDP AKSQ L +++ + R+ YT+G+ SS GLTAAV+KD + E ++E
Sbjct: 98 LRGDINICVVGDPSTAKSQFLKHVEEFSARAVYTSGKASSAAGLTAAVVKDEESSEFVIE 157
Query: 186 GGALVLADQGVCCIDEFDKM 245
GA++LAD GVCCIDEFDKM
Sbjct: 158 AGAMMLADNGVCCIDEFDKM 177
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 257 RTAIHEVMEQQTISIAKAGIMTCLNARVSILA 352
+ AIHE MEQQTIS+ KAG+ LN I++
Sbjct: 182 QVAIHEAMEQQTISLTKAGVKQNLNMSAPIMS 213
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 386 KRTIEQNIQLPAALLSRFDLLWLIQDKPNREKDLELA 496
K ++QN+ + A ++SRFDL +++ D+ N D +A
Sbjct: 198 KAGVKQNLNMSAPIMSRFDLFFILVDECNEVVDYAIA 234
>SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 94.3 bits (224), Expect = 1e-19
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +3
Query: 3 KIRGNINICLMGDPGVAKSQLLNYIDRLAPRSQYTTGRGSSGVGLTAAVLKDPFTGEMML 182
++RG ++ L+GDPG KSQ L Y ++ PRS TTG GS+ GLT A ++D +GE L
Sbjct: 964 RVRGESHMLLIGDPGTGKSQFLKYSAKIMPRSVLTTGIGSTSAGLTVAAVRD--SGEWQL 1021
Query: 183 EGGALVLADQGVCCIDEFDKMAEN 254
E GALVLAD G+CCIDEF+ + E+
Sbjct: 1022 EAGALVLADGGLCCIDEFNSIREH 1045
Score = 75.8 bits (178), Expect = 4e-14
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +2
Query: 251 EH-RTAIHEVMEQQTISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAAL 427
EH R +IHE MEQQTIS+AKAG++ LN R +ILAA NP G+ + +++ N L + L
Sbjct: 1044 EHDRGSIHEAMEQQTISVAKAGMVCKLNTRTTILAATNPK-GQLDIDQSLSVNTALASPL 1102
Query: 428 LSRFDLLWLIQDKPNREKD 484
LSRFDL++++QD N + D
Sbjct: 1103 LSRFDLVFVLQDVKNEDWD 1121
>SB_6119| Best HMM Match : MCM (HMM E-Value=3.6e-13)
Length = 100
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +2
Query: 257 RTAIHEVMEQQTISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAALLSR 436
RTAIHEVMEQ ++I+KAGI LNAR S+LAAANP +GRY+ + NI + +LLSR
Sbjct: 31 RTAIHEVMEQGRVTISKAGIHAKLNARCSVLAAANPVFGRYDEFKNPMDNIGMQDSLLSR 90
Query: 437 FDLLWLIQDK 466
FDLL+++ D+
Sbjct: 91 FDLLFIVLDQ 100
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3
Query: 180 LEGGALVLADQGVCCIDEFDKMAE 251
LE GA+VLAD+GV CIDEFDKM++
Sbjct: 5 LEAGAMVLADRGVVCIDEFDKMSD 28
>SB_55518| Best HMM Match : MCM (HMM E-Value=8.6e-19)
Length = 171
Score = 75.8 bits (178), Expect = 4e-14
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +2
Query: 251 EH-RTAIHEVMEQQTISIAKAGIMTCLNARVSILAAANPAYGRYNPKRTIEQNIQLPAAL 427
EH R +IHE MEQQTIS+AKAG++ LN R +ILAA NP G+ + +++ N L + L
Sbjct: 53 EHDRGSIHEAMEQQTISVAKAGMVCKLNTRTTILAATNPK-GQLDIDQSLSVNTALASPL 111
Query: 428 LSRFDLLWLIQDKPNREKD 484
LSRFDL++++QD N + D
Sbjct: 112 LSRFDLVFVLQDVKNEDWD 130
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +3
Query: 90 PRSQYTTGRGSSGVGLTAAVLKDPFTGEMMLEGGALVLADQGVCCIDEFDKMAEN 254
PRS TTG GS+ GLT A ++D +GE LE GALVLAD G+CCIDEF+ + E+
Sbjct: 2 PRSVLTTGIGSTSAGLTVAAVRD--SGEWQLEAGALVLADGGLCCIDEFNSIREH 54
>SB_12515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 769
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +3
Query: 189 GALVLADQGVCCIDEFDKMAENT 257
GALVL+D G+CCIDEFDKM ++T
Sbjct: 376 GALVLSDNGICCIDEFDKMNDST 398
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 586 SPSARSPPCRARSPTTSSLHTSSYGVKLETHVTSRSRRPGTCSQYCASRPHSQGSDYQTR 765
+P+ PPC + T H Y + +T R + RPH QG Y+TR
Sbjct: 205 APAPCMPPCH--TVQTVHQHAEGYTTRAKTTRPGRGYTTRAKATRPRRRPHDQGKSYKTR 262
Query: 766 *KGGR 780
K R
Sbjct: 263 EKATR 267
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 30.7 bits (66), Expect = 1.4
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 466 TQSRERLRAGEHIALCTSTRPSRPAASARCP*-SWSGATWRSPSARSPPCRARSPTTSSL 642
++SR R R+ H S + S + +R P S S RSP P R+RSP +S
Sbjct: 212 SRSRSRSRSRSHRK---SRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRSPRSSKR 268
Query: 643 HTSSYG-VKLETHVTSRSRR 699
+ SS K +H SRS R
Sbjct: 269 YRSSRSHRKHRSHSRSRSPR 288
>SB_52559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = +1
Query: 520 TRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPTTSSLHTSSYGVKLET--HV--TS 687
T P + +C +W + + + PP + P ++T+ G T HV T
Sbjct: 33 THPCEGSPDLKCGGTWRNSVYAVEAEVKPPLQ---PGHEYMYTNPQGSAPLTRDHVIYTE 89
Query: 688 RSRRP-GTCSQYCASRPHSQGSDY 756
+S R TCSQYC P Q ++
Sbjct: 90 KSVRDVNTCSQYCELMPDCQSINF 113
>SB_17646| Best HMM Match : DUF1521 (HMM E-Value=0.048)
Length = 484
Score = 29.9 bits (64), Expect = 2.5
Identities = 31/102 (30%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Frame = +1
Query: 472 SRERLRAGEHIALCTSTRPSRPAASARCP*SWSGATWRS----PSARSPPCRARSPTTSS 639
+R L A A C TR P S R S S A S S R R R TT +
Sbjct: 275 NRRHLEASHLAANCKETRNFSPRTSTRLDSSISYADHASLTLFKSQRRLLSRERKGTTPT 334
Query: 640 LHTSSYGVKLETHVTSRSRRPGTCSQYCASRPHSQGSDYQTR 765
+S G L SRR S+ S GS+ R
Sbjct: 335 SASSPEGSILTNQEGKSSRRASDVSECIEKEEMSSGSEISDR 376
>SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33)
Length = 1224
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/86 (29%), Positives = 36/86 (41%)
Frame = +3
Query: 18 INICLMGDPGVAKSQLLNYIDRLAPRSQYTTGRGSSGVGLTAAVLKDPFTGEMMLEGGAL 197
I + L G PG KSQL +QY R G G A L T E +LE
Sbjct: 539 ITVYLTGPPGSGKSQLSRQYG-----AQYGQ-RSHHGEGCVVATLHAE-TPESLLESYKQ 591
Query: 198 VLADQGVCCIDEFDKMAENTAQPYTK 275
++ + G+C D D+ + Y++
Sbjct: 592 LVKELGLCISDNTDEATRVKLKTYSQ 617
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 514 TSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPTTSSLHTSSY 657
TST P S C S++ T + + P + +PTTS T+SY
Sbjct: 45 TSTTSYTPTPSYTCTTSYTSTTSYTSTTSYTPTTSYTPTTSYTPTTSY 92
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 514 TSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPTTSSLHTSSYGVKLE-THVTS 687
T T P S C S++ T +P+ P + + TTS T+SY TH TS
Sbjct: 117 TPTTSYTPTTSYTCTTSYTSTTSYTPTTSYTPTTSYTLTTSYTCTTSYTCTTSYTHTTS 175
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 499 HIALCTSTRPSRPAASARCP*SWSGATWRSPSARSPPCRARSPTTSSL-HTSS 654
H+ CT + PS P+ + + +T +PS S P +P+T SL HT S
Sbjct: 631 HLCTCTLSTPSTPSTPST---RSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPS 680
>SB_22386| Best HMM Match : HLH (HMM E-Value=1.6e-13)
Length = 470
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 241 LSNSSIQQTPWSASTRAPPSSII 173
L+N++I++ PW +STR SS++
Sbjct: 338 LANANIREKPWKSSTREEGSSLV 360
>SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 832
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 719 TAPLDRTRKAQIIRRVEKEDVSEAIRL 799
TAPLDRT+ A +IR ++++ V + +RL
Sbjct: 669 TAPLDRTQMANLIRELQQK-VEDFLRL 694
>SB_15006| Best HMM Match : Stig1 (HMM E-Value=2)
Length = 991
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -3
Query: 164 EWV-LQNSSSEADARGAPARGVLTPGREPVDVVEQLRLRNTRIAHQAD 24
+WV ++N S+ + G +RGVL PG+ V V Q + +N + H +D
Sbjct: 571 DWVVIENGVSDMNL-GGQSRGVLYPGK-AVPAVVQDQSQNATVRHWSD 616
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,864,934
Number of Sequences: 59808
Number of extensions: 519498
Number of successful extensions: 2391
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2369
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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