Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30649X
         (474 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7; Endoptery...   137   1e-31
UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n...    65   9e-10
UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4; Sophop...    59   4e-08
UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-...    52   5e-06
UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to nucleoplas...    50   3e-05
UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3; Ech...    46   6e-04
UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria pectini...    37   0.26 
UniRef50_Q24CJ4 Cluster: Putative uncharacterized protein; n=1; ...    34   1.8  
UniRef50_A7RZK8 Cluster: Predicted protein; n=1; Nematostella ve...    33   4.3  
UniRef50_Q2GQF6 Cluster: Putative uncharacterized protein; n=1; ...    32   7.4  
UniRef50_Q2H044 Cluster: Putative uncharacterized protein; n=1; ...    31   9.8  

>UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7;
           Endopterygota|Rep: Nucleoplasmin isoform 2 - Bombyx mori
           (Silk moth)
          Length = 187

 Score =  137 bits (331), Expect = 1e-31
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +2

Query: 59  MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 238
           MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL
Sbjct: 1   MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 60

Query: 239 QEAVK 253
           QEAVK
Sbjct: 61  QEAVK 65



 Score = 72.9 bits (171), Expect = 3e-12
 Identities = 34/35 (97%), Positives = 34/35 (97%)
 Frame = +1

Query: 250 KTPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 354
           K PVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG
Sbjct: 65  KLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 99


>UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n=1;
           Maconellicoccus hirsutus|Rep: Nucleoplasmin isoform
           1-like protein - Maconellicoccus hirsutus (hibiscus
           mealybug)
          Length = 176

 Score = 64.9 bits (151), Expect = 9e-10
 Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
 Frame = +2

Query: 59  MTDEFFYGVTLSSSHQSETWDPEAKAE-------YPRSNKLVIRQALLGPDAKPDELNVI 217
           MT+++F+G+TL  +  S+ WDP+ K +       Y   + L+++QA+LGP+AK  E+NV+
Sbjct: 1   MTEDYFWGLTLDKNKTSDLWDPDVKNDANDSTQGYRGEHTLLVKQAVLGPEAKDGEINVV 60

Query: 218 QVEAMSLQEAVKH 256
           +VEAM  +  VK+
Sbjct: 61  EVEAMGYKSDVKY 73



 Score = 43.2 bits (97), Expect = 0.003
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = +1

Query: 250 KTPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 354
           K P+ VLK G      LD+ FPD PVTF L++GSG
Sbjct: 72  KYPITVLKGGSQHQSLLDLLFPDPPVTFKLIKGSG 106


>UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4;
           Sophophora|Rep: Nucleoplasmin-like protein - Drosophila
           melanogaster (Fruit fly)
          Length = 152

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +2

Query: 59  MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQV 223
           M +E FYGVTL++   S TWD +   +Y R  KLVI+Q LLG +AK +E NV++V
Sbjct: 1   MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEV 53



 Score = 45.2 bits (102), Expect = 7e-04
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 244 SSKTPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 354
           S + P+AVLK GE+R V  D+EF ++ VTF L++GSG
Sbjct: 59  SVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSG 95


>UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 156

 Score = 52.4 bits (120), Expect = 5e-06
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = +1

Query: 241 RSSKTPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 354
           ++ K P+AVLKVGE+R +R ++EFP+  VTF LVQGSG
Sbjct: 68  KTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSG 105



 Score = 50.4 bits (115), Expect = 2e-05
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = +2

Query: 59  MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVE 226
           M  E FYGVTLS       ++ P+   EY   S+KL+I+Q  LGP+AK  E NV+Q E
Sbjct: 1   MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAE 58


>UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to
           nucleoplasmin-like protein; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to
           nucleoplasmin-like protein - Nasonia vitripennis
          Length = 141

 Score = 49.6 bits (113), Expect = 3e-05
 Identities = 19/35 (54%), Positives = 29/35 (82%)
 Frame = +1

Query: 250 KTPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSG 354
           K P+A+L++G++  + LD+ FPD PVTFTL++GSG
Sbjct: 28  KIPIALLEMGKTSQIILDLSFPDPPVTFTLIKGSG 62



 Score = 39.5 bits (88), Expect = 0.037
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +2

Query: 173 ALLGPDAKPDELNVIQVEAMSLQEAVK 253
           ALLGP+AK  ELNV+QVEAM L+  +K
Sbjct: 2   ALLGPEAKAGELNVLQVEAMGLKGPIK 28


>UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3;
           Echinacea|Rep: Mitotic apparatus protein p62 -
           Lytechinus pictus (Painted sea urchin)
          Length = 411

 Score = 45.6 bits (103), Expect = 6e-04
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
 Frame = +2

Query: 59  MTDEFFYGVTLSSSHQSETWDPEA--------KAEYPRSNKLVIRQALLGPDAKPDELNV 214
           M  E+F+G TLS   +   WDPE+          E   S+ L ++QA+LG +AK D+ NV
Sbjct: 1   MAKEYFWGATLSKDKKIFKWDPESDFLDDEDDDEEDSISHFLFLKQAVLGVNAKDDDRNV 60

Query: 215 IQVEAMS 235
           I+VE ++
Sbjct: 61  IEVETIN 67


>UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria
           pectinifera|Rep: Nucleolar protein - Asterina
           pectinifera (Starfish)
          Length = 346

 Score = 36.7 bits (81), Expect = 0.26
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
 Frame = +2

Query: 59  MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNK--------LVIRQALLGPDAKPDELNV 214
           M+ EFF+G +L+ + +   W+P    E    N         L ++QA+LG  AK  E NV
Sbjct: 1   MSKEFFWGDSLTGTKKEVKWNPSLDDEDDFDNLDSDGIQHFLFLKQAVLGATAKEGERNV 60

Query: 215 IQVE 226
           +++E
Sbjct: 61  VEIE 64


>UniRef50_Q24CJ4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 825

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +2

Query: 104 QSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKHQSQY*KLVN 283
           +S+  + E K  Y   ++   +Q L+  D  P+E+ +IQ   M  Q+    QSQY +L N
Sbjct: 102 KSQIHNYEQKQNYHSHDQTQQQQDLMDSDPNPNEIIIIQQNYMIQQQQQLTQSQYDQLQN 161

Query: 284 Q 286
           Q
Sbjct: 162 Q 162


>UniRef50_A7RZK8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 362

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
 Frame = +2

Query: 68  EFFYGVTLSSSHQSETWDPEAKAEYPR----SNKLVIRQALLGPDAKPDELNVIQVEAMS 235
           E F+G  LS S  + TW+PE   E        +KLV+ QA LG  +K    ++++V +M 
Sbjct: 7   EDFWGCVLSKSEDTVTWNPEFDGEDTLLGQIEHKLVLSQACLG--SKATGKSMVEVTSMD 64

Query: 236 LQ 241
            +
Sbjct: 65  FK 66


>UniRef50_Q2GQF6 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1496

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 133 SRIPTQQQARHSSSIVRSRCQTR*IKCDTG-GSHVTTRSSKTPVA-VLKVGESR 288
           SR   +QQ RH +SI  + C+ R I+C  G G    T+  +T  A ++K  + R
Sbjct: 29  SRSSAKQQVRHRASIACASCRERRIRCVVGEGESECTQCRRTGAACIIKDDDER 82


>UniRef50_Q2H044 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 601

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 113 TWDPEAKAEYPRSNKLVIRQAL 178
           +WDP+A A+  +SNK V+RQ L
Sbjct: 463 SWDPDALAQLAQSNKRVVRQTL 484


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,765,602
Number of Sequences: 1657284
Number of extensions: 7916622
Number of successful extensions: 19171
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19155
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)