Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30648
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 23  LLNFIVINCFQINNLKYY 76
           LLN I I C + N + +Y
Sbjct: 71  LLNSIQIRCIESNMISFY 88


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 240 RNIVSGWTRISQVYQSTLD 296
           +NI S    ISQ+  STLD
Sbjct: 43  KNIESHLNAISQITNSTLD 61


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 196 NMMDGNDLSSEITRKGILSQVGHEYRRFI 282
           NM++ + LS   T  G L  +GH +  +I
Sbjct: 345 NMIESSILSPNRTYYGDLHNMGHVFISYI 373


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/39 (17%), Positives = 18/39 (46%)
 Frame = +2

Query: 329 WKCVGHGCIYYPHNY*TRMVYCHICVGYLPFKLVHCILN 445
           W+C+    + Y  +  ++++    C   +  K   C++N
Sbjct: 161 WRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQKFCVVN 199


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 480 DENGPALPTRLVKNLDHSLDDYQNSS 557
           DE+  +  + +V++LD +  D +NSS
Sbjct: 43  DEDRFSFTSSMVQSLDGNSSDLENSS 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,441
Number of Sequences: 336
Number of extensions: 4010
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)