Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30648
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456806-1|CAG33087.1| 196|Homo sapiens RER1 protein. 128 3e-29
BT007224-1|AAP35888.1| 196|Homo sapiens similar to S. cerevisia... 128 3e-29
BC004965-1|AAH04965.1| 196|Homo sapiens RER1 retention in endop... 128 3e-29
AL513477-2|CAI22604.1| 196|Homo sapiens RER1 retention in endop... 128 3e-29
AJ001421-1|CAA04754.1| 196|Homo sapiens Rer1 protein protein. 128 3e-29
AF157324-1|AAF67490.1| 214|Homo sapiens RER1 protein protein. 128 3e-29
AL513477-5|CAI22607.1| 187|Homo sapiens RER1 retention in endop... 111 3e-24
AL513477-4|CAI22606.1| 158|Homo sapiens RER1 retention in endop... 111 3e-24
AF091071-1|AAC72940.1| 206|Homo sapiens Rer1 protein. 111 3e-24
AL513477-3|CAI22605.1| 117|Homo sapiens RER1 retention in endop... 38 0.027
BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 1... 30 7.2
AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 1... 30 7.2
AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 1... 30 7.2
>CR456806-1|CAG33087.1| 196|Homo sapiens RER1 protein.
Length = 196
Score = 128 bits (308), Expect = 3e-29
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRQ 691
+EEFRPFIRRLPEFKFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKRQ
Sbjct: 106 NEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQ 165
Query: 692 IKHMIKY 712
IKHMIKY
Sbjct: 166 IKHMIKY 172
Score = 110 bits (264), Expect = 6e-24
Identities = 47/83 (56%), Positives = 66/83 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPT 506
FL+PK+DP++ ++D ++GP+LPT
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPT 103
>BT007224-1|AAP35888.1| 196|Homo sapiens similar to S. cerevisiae
RER1 protein.
Length = 196
Score = 128 bits (308), Expect = 3e-29
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRQ 691
+EEFRPFIRRLPEFKFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKRQ
Sbjct: 106 NEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQ 165
Query: 692 IKHMIKY 712
IKHMIKY
Sbjct: 166 IKHMIKY 172
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
>BC004965-1|AAH04965.1| 196|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog (S. cerevisiae) protein.
Length = 196
Score = 128 bits (308), Expect = 3e-29
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRQ 691
+EEFRPFIRRLPEFKFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKRQ
Sbjct: 106 NEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQ 165
Query: 692 IKHMIKY 712
IKHMIKY
Sbjct: 166 IKHMIKY 172
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
>AL513477-2|CAI22604.1| 196|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homologquitin protein ligase 1
protein.
Length = 196
Score = 128 bits (308), Expect = 3e-29
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRQ 691
+EEFRPFIRRLPEFKFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKRQ
Sbjct: 106 NEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQ 165
Query: 692 IKHMIKY 712
IKHMIKY
Sbjct: 166 IKHMIKY 172
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
>AJ001421-1|CAA04754.1| 196|Homo sapiens Rer1 protein protein.
Length = 196
Score = 128 bits (308), Expect = 3e-29
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRQ 691
+EEFRPFIRRLPEFKFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKRQ
Sbjct: 106 NEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQ 165
Query: 692 IKHMIKY 712
IKHMIKY
Sbjct: 166 IKHMIKY 172
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
>AF157324-1|AAF67490.1| 214|Homo sapiens RER1 protein protein.
Length = 214
Score = 128 bits (308), Expect = 3e-29
Identities = 55/67 (82%), Positives = 59/67 (88%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRQ 691
+EEFRPFIRRLPEFKFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKRQ
Sbjct: 106 NEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQ 165
Query: 692 IKHMIKY 712
IKHMIKY
Sbjct: 166 IKHMIKY 172
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
>AL513477-5|CAI22607.1| 187|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog; alpha polypeptide
protein.
Length = 187
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFW 562
+EEFRPFIRRLPEFKFW
Sbjct: 106 NEEFRPFIRRLPEFKFW 122
>AL513477-4|CAI22606.1| 158|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homologdogene protein.
Length = 158
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
Score = 97.5 bits (232), Expect = 4e-20
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLF 670
+EEFRPFIRRLPEFKFW + TK L+A CTF DAFN+PVFWPILVMYFI LF
Sbjct: 106 NEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLF 158
>AF091071-1|AAC72940.1| 206|Homo sapiens Rer1 protein.
Length = 206
Score = 111 bits (266), Expect = 3e-24
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIA 437
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ QGWYIVTYALGIYHLNLFIA
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIA 81
Query: 438 FLTPKIDPAMDLDDDENGPALPTR 509
FL+PK+DP++ ++D ++GP+LPT+
Sbjct: 82 FLSPKVDPSL-MEDSDDGPSLPTK 104
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 562 AVRYQKHFNSFLLYFCGCFQYSSILAYSSYVFHNIILYYYEETNQAYD 705
A YQ H + LYF FQ +LA S V H+ +LY+ EE NQA+D
Sbjct: 159 ACGYQGHPCGYGLYFLRRFQRPGVLADSGDVLHHALLYHDEEANQAHD 206
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 512 SEEFRPFIRRLPEFKFW 562
+EEFRPFIRRLPEFKFW
Sbjct: 106 NEEFRPFIRRLPEFKFW 122
>AL513477-3|CAI22605.1| 117|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog, 11, 17.3kDa protein.
Length = 117
Score = 38.3 bits (85), Expect = 0.027
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 258 WTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQ 380
+TR+ Q+YQS LD+ TP+ RWV + + ++IR+ Q
Sbjct: 22 FTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQ 62
>BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 413 NTQRICDNIPSLFSNYADNKCSHDQRTSN--PPCLCVRGPSV*CTLINLRYSCP 258
N QRI + C H Q+ PPC C+ P+ C + YSCP
Sbjct: 315 NEQRILAQQVHALERRLLSACYHHQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 368
>AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 12
protein.
Length = 646
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 413 NTQRICDNIPSLFSNYADNKCSHDQRTSN--PPCLCVRGPSV*CTLINLRYSCP 258
N QRI + C H Q+ PPC C+ P+ C + YSCP
Sbjct: 448 NEQRILAQQVHALERRLLSACYHHQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 501
>AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 413 NTQRICDNIPSLFSNYADNKCSHDQRTSN--PPCLCVRGPSV*CTLINLRYSCP 258
N QRI + C H Q+ PPC C+ P+ C + YSCP
Sbjct: 315 NEQRILAQQVHALERRLLSACYHHQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 368
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,333,220
Number of Sequences: 237096
Number of extensions: 2043837
Number of successful extensions: 4605
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4596
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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