Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30646X
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   0.83 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   4.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   7.7  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 0.83
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 23  FIERTIKKDLSQKNC*TLNNCI 88
           F +RT++KDLS   C    NCI
Sbjct: 109 FFKRTVRKDLSYA-CREEKNCI 129


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 365 TVFLVDQCYISAQLYL 318
           TVF V QCY++ +L L
Sbjct: 174 TVFNVAQCYLTTELVL 189


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 365 TVFLVDQCYISAQLYL 318
           TVF V  CY++++L L
Sbjct: 531 TVFNVVHCYLASELVL 546


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 187 NNEEPDWPHIPKFKKH 234
           N +EPDW  I K + H
Sbjct: 468 NVDEPDWKPISKEEIH 483


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLL 317
           + C+R    + G    RR++++  LL
Sbjct: 556 DCCIRYDVSLSGLGSDRRLELFLELL 581


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,098
Number of Sequences: 336
Number of extensions: 1553
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)