Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30646X
         (395 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0739 + 5468642-5468857,5468978-5469051,5469651-5470083           27   4.1  
01_06_0903 + 32862551-32864752,32865341-32865535,32866219-328665...    27   4.1  
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628...    27   5.5  
07_01_0879 - 7290890-7291694,7291810-7291943,7292089-7292227,729...    27   5.5  
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131...    27   7.2  
07_03_1161 - 24434449-24434790                                         26   9.6  

>06_01_0739 + 5468642-5468857,5468978-5469051,5469651-5470083
          Length = 240

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 285 HRRMDIYKRLLQVELCRNIALIHEENGYDCMD 380
           H  +D+ K+   V   R +AL+ +ENG DC D
Sbjct: 50  HGNVDLGKKSSGVAR-RRLALLQQENGVDCSD 80


>01_06_0903 +
           32862551-32864752,32865341-32865535,32866219-32866523,
           32866664-32866849,32867137-32867314,32867548-32867574
          Length = 1030

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +2

Query: 191 MRSLIGRTYRNLRNTKGDLCQNERTNVRV---CSAP*NGYIQEATPGRAVQKYSTDPRGK 361
           +R L+GR+YR+L ++   +   ++++  V    S   +     A P  A    S  P G 
Sbjct: 44  LRQLVGRSYRDLLDSADSILLIKQSSDAVSGNLSRISDSLASLAPPPEAPPAASPSPSGG 103

Query: 362 RLRLY 376
           R+RLY
Sbjct: 104 RVRLY 108


>09_02_0251 -
           6282420-6282526,6282642-6283104,6283223-6283289,
           6283536-6283808,6284096-6284907,6285402-6285479,
           6285586-6285636,6285737-6285817,6285903-6285982,
           6288481-6288652
          Length = 727

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 136 ENSEKENKITETPMEDENNEEPDWPHIP 219
           E ++KENK +    E+ +N+E D  HIP
Sbjct: 184 EITDKENKESAADEEEADNDEIDSRHIP 211


>07_01_0879 -
           7290890-7291694,7291810-7291943,7292089-7292227,
           7292338-7292585
          Length = 441

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 139 NSEKENKITETPMEDENNEEPDWPHIP 219
           +SE++N + E P + +N++EPD  H P
Sbjct: 218 SSEEDNNVDEPPPK-KNHQEPDDAHAP 243


>03_06_0014 -
           31012116-31012229,31012773-31012985,31013058-31013171,
           31013909-31014040,31014624-31014692,31014763-31015017,
           31015347-31015520,31016104-31016280,31016999-31017107,
           31017343-31017506,31018221-31018517
          Length = 605

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 136 ENSEKENKITETPMEDENNEEPD 204
           E  + E  I +T M DENNEE +
Sbjct: 549 EEEDPEEVIGDTSMSDENNEEQE 571


>07_03_1161 - 24434449-24434790
          Length = 113

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 82  LYLGRI*AAA*VSKVNFMENSEKENKITETPMEDENNEEPDWP 210
           L L  + A A  S        E+E   T  P E+E+ EEP+ P
Sbjct: 9   LLLAALLACAAASGAAARRLEEEEPSSTTAPAEEEDQEEPNHP 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,694,714
Number of Sequences: 37544
Number of extensions: 144467
Number of successful extensions: 401
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)