Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30646X
(395 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69028-1|CAA93152.1| 494|Homo sapiens beta 2 isoform of 61kDa r... 29 5.6
L42374-1|AAC37602.1| 497|Homo sapiens protein phosphatase 2A B5... 29 5.6
BC045619-1|AAH45619.1| 497|Homo sapiens PPP2R5B protein protein. 29 5.6
AB209289-1|BAD92526.1| 369|Homo sapiens beta isoform of regulat... 29 5.6
X51473-1|CAA35837.1| 212|Homo sapiens fibrinogen gamma chain (p... 28 9.7
M10014-2|AAB59530.1| 453|Homo sapiens fibrinogen gamma-prime ch... 28 9.7
M10014-1|AAB59531.1| 437|Homo sapiens fibrinogen gamma chain pr... 28 9.7
BX538098-1|CAD98014.1| 399|Homo sapiens hypothetical protein pr... 28 9.7
BT007081-1|AAP35744.1| 437|Homo sapiens fibrinogen, gamma polyp... 28 9.7
BC021674-1|AAH21674.1| 437|Homo sapiens fibrinogen gamma chain ... 28 9.7
BC007044-1|AAH07044.1| 437|Homo sapiens fibrinogen gamma chain ... 28 9.7
AF350254-2|AAK19752.2| 453|Homo sapiens fibrinogen gamma chain,... 28 9.7
AF350254-1|AAK19751.2| 437|Homo sapiens fibrinogen gamma chain,... 28 9.7
>Z69028-1|CAA93152.1| 494|Homo sapiens beta 2 isoform of 61kDa
regulatory subunit of PP2A protein.
Length = 494
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 172 PMEDENNEEPDWPHI 216
P EDE N EP WPH+
Sbjct: 148 PEEDEPNLEPSWPHL 162
>L42374-1|AAC37602.1| 497|Homo sapiens protein phosphatase 2A
B56-beta protein.
Length = 497
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 172 PMEDENNEEPDWPHI 216
P EDE N EP WPH+
Sbjct: 151 PEEDEPNLEPSWPHL 165
>BC045619-1|AAH45619.1| 497|Homo sapiens PPP2R5B protein protein.
Length = 497
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 172 PMEDENNEEPDWPHI 216
P EDE N EP WPH+
Sbjct: 151 PEEDEPNLEPSWPHL 165
>AB209289-1|BAD92526.1| 369|Homo sapiens beta isoform of regulatory
subunit B56, protein phosphatase 2A variant protein.
Length = 369
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 172 PMEDENNEEPDWPHI 216
P EDE N EP WPH+
Sbjct: 178 PEEDEPNLEPSWPHL 192
>X51473-1|CAA35837.1| 212|Homo sapiens fibrinogen gamma chain
(partial) (212 AA) protein.
Length = 212
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 56 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 111
>M10014-2|AAB59530.1| 453|Homo sapiens fibrinogen gamma-prime chain
protein.
Length = 453
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 130 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 185
>M10014-1|AAB59531.1| 437|Homo sapiens fibrinogen gamma chain
protein.
Length = 437
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 130 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 185
>BX538098-1|CAD98014.1| 399|Homo sapiens hypothetical protein
protein.
Length = 399
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 92 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 147
>BT007081-1|AAP35744.1| 437|Homo sapiens fibrinogen, gamma
polypeptide protein.
Length = 437
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 130 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 185
>BC021674-1|AAH21674.1| 437|Homo sapiens fibrinogen gamma chain
protein.
Length = 437
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 130 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 185
>BC007044-1|AAH07044.1| 437|Homo sapiens fibrinogen gamma chain
protein.
Length = 437
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 130 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 185
>AF350254-2|AAK19752.2| 453|Homo sapiens fibrinogen gamma chain,
isoform gamma-B precursor protein.
Length = 453
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 130 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 185
>AF350254-1|AAK19751.2| 437|Homo sapiens fibrinogen gamma chain,
isoform gamma-A precursor protein.
Length = 437
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 240 ETCVRMRELMYGYAQHRRMDIYKRLLQVEL-----CRNIALIHEENGYDCMDVENR 392
++ +R + +Y + +++ +++ Q+E C++ IH+ G DC D+ N+
Sbjct: 130 DSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANK 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,901,679
Number of Sequences: 237096
Number of extensions: 913100
Number of successful extensions: 2100
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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