Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30646X
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical pr...    30   0.69 
U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical pr...    30   0.69 
U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical pr...    29   1.6  
U97007-9|AAB52294.2|  139|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical p...    27   6.4  
Z70203-3|CAA94106.2|  219|Caenorhabditis elegans Hypothetical pr...    27   6.4  
U53336-2|AAA96175.1|  571|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical pr...    26   8.5  

>U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical
           protein T05C1.4b protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 0.69
 Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 300 IYKRLLQVELCRNIALI-HEENGYDCMDVE 386
           ++KRLL ++LC +  +I H +  +DC+ ++
Sbjct: 9   LFKRLLTLQLCHHFDIIPHRDQSFDCVQMQ 38


>U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical
           protein T05C1.4a protein.
          Length = 1185

 Score = 29.9 bits (64), Expect = 0.69
 Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 300 IYKRLLQVELCRNIALI-HEENGYDCMDVE 386
           ++KRLL ++LC +  +I H +  +DC+ ++
Sbjct: 9   LFKRLLTLQLCHHFDIIPHRDQSFDCVQMQ 38


>U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical
           protein F55F8.7 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 148 KENKITETPMEDENNEEPDWP 210
           KE KI++T  +DE+NE+P  P
Sbjct: 140 KEKKISKTESDDEDNEQPPEP 160


>U97007-9|AAB52294.2|  139|Caenorhabditis elegans Hypothetical
           protein ZC196.1 protein.
          Length = 139

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 136 ENSEKENKITETPMEDENNEEPD 204
           ENS K N I+E  + D + E+PD
Sbjct: 58  ENSMKTNAISENTINDVHQEQPD 80


>Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical
           protein F11A5.15 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 82  IIQCLAILLTQILFYCTFYKVITQYC 5
           I QC  ++   +LF+C F+ +I  +C
Sbjct: 133 INQCDPLITISVLFFCAFFILIFLFC 158


>Z70203-3|CAA94106.2|  219|Caenorhabditis elegans Hypothetical
           protein C05G5.3 protein.
          Length = 219

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 139 NSEKENKITETPMEDENNEEPDWPHIPKFKKHKGRLVSE*EN*CTGMLST 288
           NSEK+N   +T  E E +E+ +     +  +   R ++  +N C    ST
Sbjct: 81  NSEKDNSEEKTESESETDEQDEDEEEEQMPQFNNRKITNTQNFCPDEPST 130


>U53336-2|AAA96175.1|  571|Caenorhabditis elegans Hypothetical
           protein K07C11.4 protein.
          Length = 571

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 336 FCTALPGVASCIYPFYGAEHTRTLVLSF*HKSPFVFLKFRYVRP 205
           FC + P V +   P  G EH  T+  S  H    VFL  RY  P
Sbjct: 17  FCVSKPKVTTPYGPIVGFEHKSTVTGSKYH----VFLGIRYGNP 56


>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
           protein B0365.1 protein.
          Length = 1099

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 324 ELCRNIALIHEENGYDCMDVENR 392
           E CR++ + +E+ G D  DVE +
Sbjct: 125 ERCRDVIMFYEQGGVDIGDVEEK 147


>Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK899.6 protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 285 HRRMDIYKRLLQVELCRNIALIHEENGYDC 374
           HR  DI++  + +  CR+   IH+    DC
Sbjct: 9   HRIFDIWRTPININTCRSFLNIHKLQCSDC 38


>Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical
           protein ZK899.5 protein.
          Length = 308

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 285 HRRMDIYKRLLQVELCRNIALIHEENGYDC 374
           HR  DI++  + +  CR+   IH+    DC
Sbjct: 9   HRIFDIWRTPININTCRSFLNIHKLQCSDC 38


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,875,417
Number of Sequences: 27780
Number of extensions: 139726
Number of successful extensions: 393
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)