Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30644
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.17 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         27   0.23 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.6  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 553 YYCHPTYEVSVYTIWSGQPWNRMFGNLTLI 642
           Y+    Y++  Y  W  + W+    NL L+
Sbjct: 61  YFISNVYQILAYNFWKKKYWSEFLANLKLL 90


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 527 KAKSSRTPS*DRTDP*PQTRRNPEWRMRTT 438
           +++S R P   R D   QTRRNP +R RT+
Sbjct: 212 QSRSKRQPKTGRED---QTRRNPYYRPRTS 238


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 556 YCHPTYEVSVYTIWSGQPWNRMFGNL 633
           YC   Y + V T +  + W R+  NL
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 163 PLQPGL-PSSATLHWCDHLQQYPPIHRWYLLSYTALC 270
           PL  G+ P +++ H   HLQ  PP    Y  S  A C
Sbjct: 40  PLSLGMSPYASSQHHHHHLQARPPQDSPYDASVAAAC 76


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 385 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 275
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 385 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 275
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 445 EQLLLEGGVPGIAD 404
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 752 VYVQHFIADFCLYYIIK*IAFLL 684
           ++  H +   C+YY +  + FLL
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFLL 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,748
Number of Sequences: 336
Number of extensions: 4192
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)