Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30643
         (489 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...   123   4e-28
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.       123   4e-28
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...   123   4e-28
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...   123   4e-28
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...   123   4e-28
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.       123   4e-28
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...   123   4e-28
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...   123   4e-28
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...   123   4e-28
AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11 p...   109   7e-24
AL359734-1|CAI41259.1|  277|Homo sapiens seven in absentia homol...    29   8.6  
AF070550-1|AAC28638.1|  342|Homo sapiens cote1 protein.                29   8.6  

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  123 bits (296), Expect = 4e-28
 Identities = 60/88 (68%), Positives = 72/88 (81%), Gaps = 5/88 (5%)
 Frame = +3

Query: 6   ETEKAFQKQATVFLNRKGGM-----KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTG 170
           +TE+A+QKQ T+F N+K  +     K K  R++K +GLGFKTP+ AI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 171 NVSIRXRILTGVVQKMKMQRTIVIRRDY 254
           NVSIR RIL+GVV KMKMQRTIVIRRDY
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDY 92



 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 93  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145


>AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11
           protein.
          Length = 83

 Score =  109 bits (261), Expect = 7e-24
 Identities = 47/53 (88%), Positives = 51/53 (96%)
 Frame = +2

Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
           LHY+ KYNRFEKRH+NMSVHLSPCF DV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 18  LHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 70



 Score = 35.1 bits (77), Expect = 0.13
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 204 VVQKMKMQRTIVIRRDY 254
           VV KMKMQRTIVIRRDY
Sbjct: 1   VVTKMKMQRTIVIRRDY 17


>AL359734-1|CAI41259.1|  277|Homo sapiens seven in absentia homolog
           1-like (Drosophila) protein.
          Length = 277

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -2

Query: 308 RTYSCAVSRTYCIWVGSEVIAADHDSSLHLHFLNDAGED 192
           R YSC    T C W G+      H + +H +     GED
Sbjct: 119 RLYSCPCPGTVCKWQGTMDAIMPHLTKMHEYITTIEGED 157


>AF070550-1|AAC28638.1|  342|Homo sapiens cote1 protein.
          Length = 342

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 108 SLNQQSYGDACPSSSCHLSCSGKRWPVSETLSLSLS 1
           SL+ +S GD   SSSC +SC    W V    + S S
Sbjct: 291 SLHLRSCGDLSSSSSCGVSCLAAGWSVVPAPTASAS 326


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,219,080
Number of Sequences: 237096
Number of extensions: 1364776
Number of successful extensions: 2624
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2615
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)