Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30643
(489 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC... 119 2e-27
AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA... 119 2e-27
AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB... 109 2e-24
AY071038-1|AAL48660.1| 505|Drosophila melanogaster RE12612p pro... 29 2.6
AE013599-305|AAF59291.1| 505|Drosophila melanogaster CG4485-PA ... 29 2.6
AY094818-1|AAM11171.1| 616|Drosophila melanogaster LD33804p pro... 28 7.9
AE014298-3034|AAN09551.1| 541|Drosophila melanogaster CG1812-PB... 28 7.9
AE014298-3033|AAF50896.1| 616|Drosophila melanogaster CG1812-PA... 28 7.9
>AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC,
isoform C protein.
Length = 155
Score = 119 bits (286), Expect = 2e-27
Identities = 61/86 (70%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 ETEKAFQKQATVFLNRK---GGMKRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTGNV 176
+ E+AFQKQ V LNRK G K+K +R + VGLGFKTPR AIDGTYIDKKCP+TG+V
Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63
Query: 177 SIRXRILTGVVQKMKMQRTIVIRRDY 254
IR RILTGVV+K KMQRTIVIRRDY
Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDY 89
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +2
Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
LH++ KY+RFEKRHRNMSVH SP F DVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 90 LHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA,
isoform A protein.
Length = 155
Score = 119 bits (286), Expect = 2e-27
Identities = 61/86 (70%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 ETEKAFQKQATVFLNRK---GGMKRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTGNV 176
+ E+AFQKQ V LNRK G K+K +R + VGLGFKTPR AIDGTYIDKKCP+TG+V
Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63
Query: 177 SIRXRILTGVVQKMKMQRTIVIRRDY 254
IR RILTGVV+K KMQRTIVIRRDY
Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDY 89
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +2
Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
LH++ KY+RFEKRHRNMSVH SP F DVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 90 LHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB,
isoform B protein.
Length = 154
Score = 109 bits (263), Expect = 2e-24
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 RETEKAFQKQ-ATVFLNRKGGMKRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTGNVS 179
++TE++F+KQ A V + RK +K R ++ +GLGF+ P AIDGTYIDKKCP+TG+V
Sbjct: 4 QQTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVR 63
Query: 180 IRXRILTGVVQKMKMQRTIVIRRDY 254
IR RILTGVV+K KMQRTIVIRRDY
Sbjct: 64 IRGRILTGVVRKAKMQRTIVIRRDY 88
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +2
Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412
LH++ KY+RFEKRHRNMSVH SP F DVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 89 LHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141
>AY071038-1|AAL48660.1| 505|Drosophila melanogaster RE12612p
protein.
Length = 505
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 18 AFQKQATVFLNRKGGMKRKDMRHHKIVGL-GFKTPRXAIDGTYIDKK 155
+FQKQ + F NR RHHK+VGL +TP I+ + KK
Sbjct: 54 SFQKQISEFYNRT--------RHHKLVGLFNLRTPMIQINDPQLIKK 92
>AE013599-305|AAF59291.1| 505|Drosophila melanogaster CG4485-PA
protein.
Length = 505
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 18 AFQKQATVFLNRKGGMKRKDMRHHKIVGL-GFKTPRXAIDGTYIDKK 155
+FQKQ + F NR RHHK+VGL +TP I+ + KK
Sbjct: 54 SFQKQISEFYNRT--------RHHKLVGLFNLRTPMIQINDPQLIKK 92
>AY094818-1|AAM11171.1| 616|Drosophila melanogaster LD33804p
protein.
Length = 616
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 8 DRESVSETGHRFPEQERWHEEEGHASP*DCW 100
DR S + +E WHE++ SP D W
Sbjct: 572 DRASAETMAYDLDTKEWWHEKDSWDSPNDVW 602
>AE014298-3034|AAN09551.1| 541|Drosophila melanogaster CG1812-PB,
isoform B protein.
Length = 541
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 8 DRESVSETGHRFPEQERWHEEEGHASP*DCW 100
DR S + +E WHE++ SP D W
Sbjct: 497 DRASAETMAYDLDTKEWWHEKDSWDSPNDVW 527
>AE014298-3033|AAF50896.1| 616|Drosophila melanogaster CG1812-PA,
isoform A protein.
Length = 616
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 8 DRESVSETGHRFPEQERWHEEEGHASP*DCW 100
DR S + +E WHE++ SP D W
Sbjct: 572 DRASAETMAYDLDTKEWWHEKDSWDSPNDVW 602
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,688,502
Number of Sequences: 53049
Number of extensions: 417948
Number of successful extensions: 978
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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