BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30643 (489 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical pr... 105 2e-23 U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 28 3.2 Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 5.5 Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 5.5 U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 27 7.3 >Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical protein F40F11.1 protein. Length = 155 Score = 105 bits (252), Expect = 2e-23 Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 3/86 (3%) Frame = +3 Query: 6 ETEKAFQKQATVFLNRKGGM---KRKDMRHHKIVGLGFKTPRXAIDGTYIDKKCPFTGNV 176 +TE+AF KQ TV LN K + +K R+ + VGLGFK PR A++GTYIDKKCP+ GNV Sbjct: 4 QTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWAGNV 63 Query: 177 SIRXRILTGVVQKMKMQRTIVIRRDY 254 IR ILTGVV K KM RTIV+RRDY Sbjct: 64 PIRGMILTGVVLKNKMTRTIVVRRDY 89 Score = 90.6 bits (215), Expect = 5e-19 Identities = 38/53 (71%), Positives = 44/53 (83%) Frame = +2 Query: 254 LHYLPKYNRFEKRHRNMSVHLSPCFMDVEIGDIVTIGECRPLSKTVRFNVLKV 412 LHY+ KY R+EKRH+N+ H SP F D+ GD+VTIGECRPLSKTVRFNVLKV Sbjct: 90 LHYIKKYRRYEKRHKNVPAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKV 142 >U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical protein F47D12.5 protein. Length = 633 Score = 28.3 bits (60), Expect = 3.2 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 406 QNIESNCFGQRSAFADRYNITNLHVHEARRQMHGH 302 +++E CF Q F D +N+T L + + R M+ H Sbjct: 129 RSVELECFEQ---FVDLFNLTGLRILDVSRSMYKH 160 >Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein F25H8.3 protein. Length = 2165 Score = 27.5 bits (58), Expect = 5.5 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -1 Query: 69 SSCHLSCSGKRWPVSETLSLS 7 +SC++ CSG++W E S S Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCS 1031 >Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical protein F25H8.3 protein. Length = 2165 Score = 27.5 bits (58), Expect = 5.5 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -1 Query: 69 SSCHLSCSGKRWPVSETLSLS 7 +SC++ CSG++W E S S Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCS 1031 >U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine receptor, class w protein121 protein. Length = 362 Score = 27.1 bits (57), Expect = 7.3 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -2 Query: 299 SCAVSRTYCIWVGSEVIAADHDSSLHLHF 213 SCA +RTY +VGSE+ D++ S+ +F Sbjct: 193 SCAPNRTYYEYVGSELF-MDNEGSIAKYF 220 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,684,919 Number of Sequences: 27780 Number of extensions: 211740 Number of successful extensions: 577 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 556 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 576 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 914086948 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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