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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30642
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...   126   2e-29
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...   126   2e-29
12_01_1093 - 11374087-11374140,11374337-11374438,11375793-113758...    32   0.43 
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448...    30   2.3  
05_03_0130 - 8770354-8770678,8770799-8770992,8771091-8771203,877...    29   4.0  
04_04_0730 + 27618981-27619143,27619237-27619349,27619695-276198...    29   4.0  
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    29   5.3  
06_03_0543 + 21967787-21970261                                         29   5.3  
01_06_0364 - 28749825-28750053,28750442-28750621,28751018-287511...    29   5.3  
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561...    28   7.0  
11_03_0122 - 10313934-10314069,10315889-10316319                       28   9.3  
07_01_0903 - 7607588-7607953                                           28   9.3  
05_03_0489 - 14662378-14664957                                         28   9.3  
01_07_0027 - 40578075-40578437,40578647-40578767,40578852-405789...    28   9.3  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    28   9.3  

>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score =  126 bits (304), Expect = 2e-29
 Identities = 56/86 (65%), Positives = 69/86 (80%)
 Frame = +1

Query: 250 PRDVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 429
           P+D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F EPRLLI+ DP  D
Sbjct: 75  PQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTD 134

Query: 430 HQPITEASYVNIPVIALCNTDSPLRF 507
           HQPI E++  NIP IA C+TDSP+R+
Sbjct: 135 HQPIKESALGNIPTIAFCDTDSPMRY 160



 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +2

Query: 62  LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 241
           L+  E+D+  MLAA  HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12  LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71

Query: 242 IENP 253
           IENP
Sbjct: 72  IENP 75



 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = +3

Query: 495 PTKIWDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEK 674
           P +  DI IP N K   SIG ++WLLAR VL++RG +    +WDV+VDLFFYRDPEE++ 
Sbjct: 157 PMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAK- 215

Query: 675 DEQQAKEQAVVP----TKPEVVAPVHEDW 749
            EQ+ +E A+V        E  AP  + W
Sbjct: 216 -EQEEEEAALVAPDYGAVAEYAAPAADTW 243


>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score =  126 bits (304), Expect = 2e-29
 Identities = 56/86 (65%), Positives = 69/86 (80%)
 Frame = +1

Query: 250 PRDVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 429
           P+D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F EPRLLI+ DP  D
Sbjct: 75  PQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTD 134

Query: 430 HQPITEASYVNIPVIALCNTDSPLRF 507
           HQPI E++  NIP IA C+TDSP+R+
Sbjct: 135 HQPIKESALGNIPTIAFCDTDSPMRY 160



 Score = 95.5 bits (227), Expect = 4e-20
 Identities = 44/75 (58%), Positives = 55/75 (73%)
 Frame = +2

Query: 29  ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 208
           ++A   G    L+  E+DV  MLAA  HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1   MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60

Query: 209 KLVLAARAVVAIENP 253
           KL LAAR +VAIENP
Sbjct: 61  KLQLAARVIVAIENP 75



 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = +3

Query: 495 PTKIWDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEK 674
           P +  DI IP N K  +SIG ++WLLAR VL++RG +    +WDV+VDLFFYRDPEE+++
Sbjct: 157 PMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKE 216

Query: 675 DEQQAKEQ 698
            E++A  Q
Sbjct: 217 QEEEAPAQ 224


>12_01_1093 -
           11374087-11374140,11374337-11374438,11375793-11375873,
           11376005-11376343
          Length = 191

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +1

Query: 205 GKTCSGCSCCRSHREP-RDVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQA 381
           G+  SGC  CR      RD   ++ R    RAV   AA   + P   R+TPG   +    
Sbjct: 54  GRVASGCLACRRWEHLLRDGDPVAYRRLITRAVCAIAADDLSAPPPPRYTPGNSGHSQAR 113

Query: 382 AFREPRLLIVLD 417
             RE    IV D
Sbjct: 114 LVREMMKSIVAD 125


>05_05_0195 +
           23142830-23143714,23144288-23144314,23144657-23144866,
           23144976-23145242,23146290-23146376,23146495-23146553,
           23147166-23147768,23148063-23148192,23148570-23149100,
           23149636-23149743,23149911-23150456,23150957-23151079,
           23151494-23151709
          Length = 1263

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 1/117 (0%)
 Frame = +1

Query: 196 SYLGKTCSGCSCCRSHREPRDVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGA-FTNQ 372
           SYL  T  G +  R  R  RDV  ++ R       L   A    + + G+      F NQ
Sbjct: 121 SYLITTRVGEAEVRVRRRFRDVVALADRLAAAHRGLFIPARPDKSVVEGQVMQRHDFVNQ 180

Query: 373 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFGTLLSHATPSLP 543
             +A +     +   P   H P           I     + P  + T LS A PS P
Sbjct: 181 RCSALQRYLRRLAAHPVVGHSPDLRTFLTEPGAIPAFEGEQPRYWTTTLSSAAPSTP 237


>05_03_0130 -
           8770354-8770678,8770799-8770992,8771091-8771203,
           8771320-8771482
          Length = 264

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 505 FGTLLSHATPSLPTLLV*CGGCWHVKC*GFVVCF--PVT 615
           F ++++  +PS+    + CG C+ VKC G   C   PVT
Sbjct: 69  FSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVT 107


>04_04_0730 +
           27618981-27619143,27619237-27619349,27619695-27619888,
           27620141-27620465
          Length = 264

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 505 FGTLLSHATPSLPTLLV*CGGCWHVKC*GFVVCF--PVT 615
           F ++++  +PS+    + CG C+ VKC G   C   PVT
Sbjct: 69  FSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVT 107


>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
            23812210-23812285,23813064-23813072,23813243-23813335,
            23813578-23813581,23813780-23814703,23814926-23815909,
            23816073-23816118,23816376-23816951,23817253-23817798,
            23817820-23818416
          Length = 2252

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 129  TFSAPRWVVAASILVTSSSLRASTSNP 49
            TF A RWV+AA   V  + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126


>06_03_0543 + 21967787-21970261
          Length = 824

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 555 LMWWLLAREVLRLRGVLPRDQRWDVVVDLF 644
           L W++L RE  +LRGV P +  ++++ + F
Sbjct: 472 LGWFILRREAKQLRGVWPAEAGYEMIANHF 501


>01_06_0364 -
           28749825-28750053,28750442-28750621,28751018-28751147,
           28751442-28751756,28752033-28752075,28752108-28752500
          Length = 429

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 270 LITALRSACCTEVCRAHRCYAYCGAFHTRCF 362
           L+  LR    T+V RAHRC     A  T CF
Sbjct: 97  LLPLLRRRGATDVVRAHRCIPLHPALITSCF 127


>01_06_0902 +
           32853708-32853739,32854787-32855596,32856094-32856157,
           32856375-32856446
          Length = 325

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +1

Query: 136 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 243
           P   +C+ T C    C        K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300


>11_03_0122 - 10313934-10314069,10315889-10316319
          Length = 188

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 654 DPEESEKDEQQAKEQAVVPTKPEVVAPVH 740
           D EE  +DE++ KE+AV  T  +  +P H
Sbjct: 31  DDEEEAEDEEEGKEEAVDKTGEKPFSPGH 59


>07_01_0903 - 7607588-7607953
          Length = 121

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 572 QQPPHQTNRVGRLGVAWDSNVPNLSG 495
           QQPP Q  ++G  G   D+NVP+ +G
Sbjct: 30  QQPPWQRRQMGGGGADADNNVPDQAG 55


>05_03_0489 - 14662378-14664957
          Length = 859

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 609 RDQRWDVVVDLFFYRDPEESEKDEQQAKEQAVVPTKPEVVAPVHED 746
           R    DV+ +L F    +ES +D     E     T P VVA +H D
Sbjct: 768 RPSMGDVLWNLEFALQLQESTEDSSSLTEGTSASTSPLVVARLHSD 813


>01_07_0027 -
           40578075-40578437,40578647-40578767,40578852-40578952,
           40579176-40579451,40579485-40579805,40581609-40581623,
           40581969-40582295,40583287-40583538
          Length = 591

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -3

Query: 656 VTVEEQINHNIPALVTGKHTTKPQHFTCQQPPHQTNRVG 540
           V  + Q   NIP LVT   TTK + F    PPH    +G
Sbjct: 462 VNNKPQAKPNIPRLVTSTSTTKLERF---PPPHLDASIG 497


>01_06_0575 -
           30357556-30357582,30357698-30357944,30358039-30358161,
           30358275-30358301,30358475-30358633,30359764-30359948,
           30360225-30360293,30360432-30362354,30363018-30363339,
           30363506-30363543
          Length = 1039

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 172 WYPCDQLASYLGKTCSGCSCCRSHREP 252
           ++PC      +GKT S C   + HR P
Sbjct: 615 YHPCQPTVRLMGKTVSVCERSKEHRVP 641


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,276,662
Number of Sequences: 37544
Number of extensions: 550929
Number of successful extensions: 1570
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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