Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30641
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 51 6e-07
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 51 8e-07
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 48 4e-06
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 46 2e-05
At1g64030.1 68414.m07252 serpin family protein / serine protease... 46 2e-05
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 46 2e-05
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 46 3e-05
At2g14540.1 68415.m01628 serpin family protein / serine protease... 45 5e-05
At1g62170.1 68414.m07013 serpin family protein / serine protease... 42 3e-04
At2g35580.1 68415.m04357 serpin family protein / serine protease... 40 0.002
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 30 1.3
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.7
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 2.2
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 3.8
At3g11240.1 68416.m01367 arginine-tRNA-protein transferase, puta... 29 3.8
At1g51980.1 68414.m05863 mitochondrial processing peptidase alph... 29 3.8
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 28 6.7
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 28 6.7
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 27 8.9
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +2
Query: 509 IKDLVNPDSLSS--ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 640
IK +++ DS+ + ++ VL NA+YFKGAWSSKFD +T DF++
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHL 130
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/46 (45%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 509 IKDLVNPDSLSSATAAVLV--NAIYFKGAWSSKFDERLTSDRDFYV 640
IK++++ DS+ + ++L+ NA+YFKGAWS KFD +LT DF++
Sbjct: 150 IKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHL 195
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +2
Query: 509 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 646
I DL+ S+ S T V NA+YFKGAW +KFD+ T D +F+ K
Sbjct: 28 IIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGK 73
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 557 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKTN 652
+L NA+YFK AWS KFD +LT D DF++ N
Sbjct: 168 ILANAVYFKAAWSRKFDAKLTKDNDFHLLDGN 199
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 509 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 640
IKDL+ S++S T + NA+ FKGAW F++ T D DFY+
Sbjct: 151 IKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYL 194
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 509 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKTN 652
I +++ S S T + NA+YFKG W+ KFDE LT + +F++ N
Sbjct: 150 ITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGN 197
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +2
Query: 509 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 640
IK+L+ P S+++ T + NA+YFKGAW +KF + +T + F++
Sbjct: 51 IKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHL 94
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 509 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 640
IK+++ S++S T + NA+YFKGAW FD+ +T D+ F++
Sbjct: 179 IKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHL 222
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 509 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 640
IKDL+ S++S T V +A+YFKG W K+ + +T + FY+
Sbjct: 215 IKDLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYL 258
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 524 NPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV 640
NP S + T + NA++F G W S+FD LT D DF++
Sbjct: 157 NPKS-APLTDHIFANALFFNGRWDSQFDPSLTKDSDFHL 194
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +1
Query: 139 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELLKLSASL 270
E VKN +PGK VL +++L P AQL + + E E L+ ++ ++
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNV 681
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 180 REDNAFPWIIFHYFGKHSGCEVIVSIFEYIREICDG 73
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 177 EDNAFPWIIFHYFGKHSGCEVIVSIFEYIRE 85
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 204 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEYI 91
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At3g11240.1 68416.m01367 arginine-tRNA-protein transferase,
putative / arginyltransferase, putative /
arginyl-tRNA-protein transferase, putative similar to
SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC
2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
(Arginyl-tRNA--protein transferase 1) {Arabidopsis
thaliana}; contains Pfam profiles PF04377:
Arginine-tRNA-protein transferase C terminus, PF04376:
Arginine-tRNA-protein transferase N terminus
Length = 605
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -1
Query: 331 PLIDRRSRLLLANSVRIASSSGKPIASKAL 242
PL+D++ +L+N +++SSS P AS+ L
Sbjct: 481 PLLDKKPYSVLSNISKVSSSSSSPQASETL 510
>At1g51980.1 68414.m05863 mitochondrial processing peptidase alpha
subunit, putative similar to mitochondrial processing
peptidase alpha subunit, mitochondrial precursor,
Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II)
[Potato] SWISS-PROT:P29677
Length = 503
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 205 AQLALASDGETHEELLKLSASLTTML 282
A++ LA+ G HEELLK++ LT+ L
Sbjct: 256 ARMVLAASGVEHEELLKVAEPLTSDL 281
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 252 EAIGFPDDDAIRTEFASKSRDLR 320
E++GFP DD R F DLR
Sbjct: 122 ESVGFPQDDGFRLGFGGGGGDLR 144
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 252 EAIGFPDDDAIRTEFASKSRDLR 320
E++GFP DD R F DLR
Sbjct: 122 ESVGFPQDDGFRLGFGGGGGDLR 144
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 133 FTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKLSASLTTMLYEQNSRVKAV 312
F V N+ + V + F VL L + ET +KLS S TML + K V
Sbjct: 181 FLSKVNNDEVQKVEVDGFHVLFKLKDDGNLQESETSSSSIKLSESSETML-RSVAPTKRV 239
Query: 313 IFDQLKALSLK 345
++ + +K
Sbjct: 240 VYSTTRPRDIK 250
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,000,037
Number of Sequences: 28952
Number of extensions: 273074
Number of successful extensions: 927
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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