BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30640 (752 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 253 9e-68 AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.031 Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 31 0.88 Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 29 3.5 Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 29 3.5 Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 3.5 Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 29 3.5 Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 29 3.5 U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 29 3.5 AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 29 3.5 Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 4.7 Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 6.2 Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 6.2 Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 8.2 Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 28 8.2 U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 28 8.2 AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 8.2 >Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical protein B0250.1 protein. Length = 260 Score = 253 bits (620), Expect = 9e-68 Identities = 112/164 (68%), Positives = 137/164 (83%), Gaps = 1/164 (0%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+ Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60 Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379 + FRDPYK+KT K + + ++TGQF++CG KA +++GN++PVG +PEGT +CN+E K Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120 Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511 GDRG +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S NRA Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRA 164 Score = 152 bits (369), Expect = 2e-37 Identities = 66/82 (80%), Positives = 74/82 (90%) Frame = +1 Query: 505 QSMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 684 ++M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPVEHPHGGGNHQHIG Sbjct: 163 RAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHP 222 Query: 685 STVKRGTSAGRKVGLIAARRTG 750 STV+R SAG+KVGLIAARRTG Sbjct: 223 STVRRDASAGKKVGLIAARRTG 244 >AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical protein F56B3.8 protein. Length = 321 Score = 35.9 bits (79), Expect = 0.031 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +2 Query: 314 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 472 GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211 >Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical protein T24B8.1 protein. Length = 134 Score = 31.1 bits (67), Expect = 0.88 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +2 Query: 428 IGHNPDAKRTRVKLPSGAKKVLPSSNRAWSVLLLE 532 IGH D +RTR LP+G KKVL + + +LL++ Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90 >Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical protein F58A3.2c protein. Length = 1158 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 378 WEIEVVWHVPLETSPL*LDTILMLSVQE*SYRLEPRRFCHQATEHGRYCCWR 533 WEI + P T + L +++E YR+EP C Q H CWR Sbjct: 866 WEIMTLGGTPYPTIAM---PELYANLKE-GYRMEPPHLCPQEVYHLMCSCWR 913 >Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical protein F58A3.2e protein. Length = 1051 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 378 WEIEVVWHVPLETSPL*LDTILMLSVQE*SYRLEPRRFCHQATEHGRYCCWR 533 WEI + P T + L +++E YR+EP C Q H CWR Sbjct: 866 WEIMTLGGTPYPTIAM---PELYANLKE-GYRMEPPHLCPQEVYHLMCSCWR 913 >Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical protein F58A3.2d protein. Length = 1096 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 378 WEIEVVWHVPLETSPL*LDTILMLSVQE*SYRLEPRRFCHQATEHGRYCCWR 533 WEI + P T + L +++E YR+EP C Q H CWR Sbjct: 866 WEIMTLGGTPYPTIAM---PELYANLKE-GYRMEPPHLCPQEVYHLMCSCWR 913 >Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical protein F58A3.2b protein. Length = 988 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 378 WEIEVVWHVPLETSPL*LDTILMLSVQE*SYRLEPRRFCHQATEHGRYCCWR 533 WEI + P T + L +++E YR+EP C Q H CWR Sbjct: 813 WEIMTLGGTPYPTIAM---PELYANLKE-GYRMEPPHLCPQEVYHLMCSCWR 860 >Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical protein F58A3.2a protein. Length = 1040 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 378 WEIEVVWHVPLETSPL*LDTILMLSVQE*SYRLEPRRFCHQATEHGRYCCWR 533 WEI + P T + L +++E YR+EP C Q H CWR Sbjct: 865 WEIMTLGGTPYPTIAM---PELYANLKE-GYRMEPPHLCPQEVYHLMCSCWR 912 >U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. Length = 1040 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 378 WEIEVVWHVPLETSPL*LDTILMLSVQE*SYRLEPRRFCHQATEHGRYCCWR 533 WEI + P T + L +++E YR+EP C Q H CWR Sbjct: 865 WEIMTLGGTPYPTIAM---PELYANLKE-GYRMEPPHLCPQEVYHLMCSCWR 912 >AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. Length = 987 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 378 WEIEVVWHVPLETSPL*LDTILMLSVQE*SYRLEPRRFCHQATEHGRYCCWR 533 WEI + P T + L +++E YR+EP C Q H CWR Sbjct: 812 WEIMTLGGTPYPTIAM---PELYANLKE-GYRMEPPHLCPQEVYHLMCSCWR 859 >Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical protein F58E10.3a protein. Length = 561 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 133 +GR R+ +KG F +HT K L+ LD A++ Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500 >Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical protein F58E10.6 protein. Length = 330 Score = 28.3 bits (60), Expect = 6.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 134 HGYIKGVVKDIIHDPGRGAPLAVVHFR 214 HG + +V I+H P R + LA +HF+ Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311 >Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical protein F58E10.6 protein. Length = 330 Score = 28.3 bits (60), Expect = 6.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 134 HGYIKGVVKDIIHDPGRGAPLAVVHFR 214 HG + +V I+H P R + LA +HF+ Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311 >Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical protein Y57G11C.44 protein. Length = 155 Score = 27.9 bits (59), Expect = 8.2 Identities = 12/42 (28%), Positives = 24/42 (57%) Frame = +2 Query: 71 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 196 +S ++RK + LD+++ G K ++KDI +D + P+ Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42 >Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical protein T05F1.8 protein. Length = 393 Score = 27.9 bits (59), Expect = 8.2 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -1 Query: 593 LTLYLWYALPAFKIGLSI-RPPPATIPTML 507 LT W+ +FK+ +++ RPPP +P L Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESL 338 >U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical protein C33F10.12 protein. Length = 392 Score = 27.9 bits (59), Expect = 8.2 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -1 Query: 593 LTLYLWYALPAFKIGLSI-RPPPATIPTML 507 LT W+ +FK+ +++ RPPP +P L Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESL 338 >AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein 70 protein. Length = 530 Score = 27.9 bits (59), Expect = 8.2 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Frame = -1 Query: 692 TVEALPIC*WLP-----PP*GCSTGFMATPRTYG--QQLRLTL-YLWYALPAFKIGLSIR 537 T ALP C + P P +T TPRTY ++ T+ W LP Sbjct: 301 TTTALPPCVYTPAPPATAPPATATPATQTPRTYSTTTPIKTTVPQQWTTLPP-----GPE 355 Query: 536 PPPATIPTMLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQRHVPDDLYL 381 P P P+ CC + TV+ + +Q C QS ++QR + + Y+ Sbjct: 356 PTPGQGPSGECCYIDLRRIQVTVSCGVSIGNQCCHQSCSGTYQRQINLNYYI 407 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,145,918 Number of Sequences: 27780 Number of extensions: 413997 Number of successful extensions: 1115 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1075 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1114 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1788025660 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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