BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30639 (488 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 70 1e-12 09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841 70 1e-12 08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848... 70 1e-12 09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078... 52 2e-07 08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24... 30 0.87 04_01_0410 - 5411135-5411581 29 1.5 05_01_0060 - 418559-418577,418655-418738,418857-418966,419467-41... 29 2.0 08_01_0105 + 756998-757225,757311-758597 28 4.6 01_06_1148 - 34895562-34895690,34896339-34896464,34896579-348969... 27 6.1 04_04_0004 - 22089250-22089582,22090050-22090325,22090626-220912... 27 8.1 03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 27 8.1 >09_04_0633 - 19123930-19124009,19124240-19124344,19124453-19124543, 19124647-19124709,19126318-19126368,19126878-19126962, 19127102-19127283,19128493-19128582 Length = 248 Score = 69.7 bits (163), Expect = 1e-12 Identities = 31/43 (72%), Positives = 35/43 (81%) Frame = +3 Query: 246 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 374 Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK I Sbjct: 67 YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEI 109 Score = 52.0 bits (119), Expect = 2e-07 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = +2 Query: 77 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 181 IVKKR K+F R SDRY LK +WR+P+GID+RVR Sbjct: 10 IVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 44 Score = 45.6 bits (103), Expect = 2e-05 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +1 Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLP 255 ++FKG LMPNIGYGS+KKTRH LP Sbjct: 45 RKFKGCTLMPNIGYGSDKKTRHYLP 69 >09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841 Length = 133 Score = 69.7 bits (163), Expect = 1e-12 Identities = 31/43 (72%), Positives = 35/43 (81%) Frame = +3 Query: 246 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 374 Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK I Sbjct: 67 YLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEI 109 Score = 58.8 bits (136), Expect = 2e-09 Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Frame = +1 Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLPMDSVRS*FTMLKSWKS**CKTGS-TAQRSLTVSLR 357 ++FKG LMPNIGYGS+KKTRH LP + + + A+ + VS + Sbjct: 45 RKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTK 104 Query: 358 RSGS*FVERAQQLSIRVTNAAARLRSQENE 447 + VERA QL I VTN ARLRSQE+E Sbjct: 105 KRKE-IVERAAQLDIVVTNKLARLRSQEDE 133 Score = 52.0 bits (119), Expect = 2e-07 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = +2 Query: 77 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 181 IVKKR K+F R SDRY LK +WR+P+GID+RVR Sbjct: 10 IVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 44 >08_02_1315 + 26083856-26083945,26084093-26084226,26084753-26084819, 26085011-26085192,26085315-26085444 Length = 200 Score = 69.7 bits (163), Expect = 1e-12 Identities = 31/43 (72%), Positives = 35/43 (81%) Frame = +3 Query: 246 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 374 Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK I Sbjct: 134 YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEI 176 Score = 59.7 bits (138), Expect = 1e-09 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Frame = +1 Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLPMDSVRS*FTMLKSWKS**CKTGS-TAQRSLTVSLR 357 ++FKG LMPNIGYGS+KKTRH LP + + + + A+ + VS + Sbjct: 112 RKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTK 171 Query: 358 RSGS*FVERAQQLSIRVTNAAARLRSQENE 447 + VERA QL I VTN ARLRSQE+E Sbjct: 172 KRKE-IVERAAQLDIVVTNKLARLRSQEDE 200 Score = 27.9 bits (59), Expect = 4.6 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +2 Query: 77 IVKKRTKRFIRHQSDRYDKLK 139 IVKKR K+F R SDRY LK Sbjct: 10 IVKKRVKQFKRPHSDRYLCLK 30 Score = 27.9 bits (59), Expect = 4.6 Identities = 9/13 (69%), Positives = 13/13 (100%) Frame = +2 Query: 143 NWRKPRGIDNRVR 181 +WR+P+GID+RVR Sbjct: 99 SWRRPKGIDSRVR 111 >09_04_0630 + 19104678-19105463,19106169-19106348,19107775-19107864, 19108777-19108958,19109968-19109974,19111763-19111833, 19112188-19112224,19112433-19112603 Length = 507 Score = 52.0 bits (119), Expect = 2e-07 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = +2 Query: 77 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 181 IVKKR K+F R SDRY LK +WR+P+GID+RVR Sbjct: 332 IVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 366 Score = 45.6 bits (103), Expect = 2e-05 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +1 Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLP 255 ++FKG LMPNIGYGS+KKTRH LP Sbjct: 367 RKFKGCTLMPNIGYGSDKKTRHYLP 391 Score = 41.5 bits (93), Expect = 4e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +3 Query: 246 YAPNGFRKVLVHNVKELEILMMQNR 320 Y PN F+K +VHNV ELE+LMM NR Sbjct: 389 YLPNKFKKFVVHNVSELELLMMHNR 413 >08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796, 246893-247240,247882-248721,248786-248832,249470-249596, 249672-249836,249973-251370,251453-251713,251802-252161 Length = 1539 Score = 30.3 bits (65), Expect = 0.87 Identities = 21/65 (32%), Positives = 29/65 (44%) Frame = +3 Query: 78 SSKRGRRDLSGINRIAMTNLRGIGVNLEVLTTESAAIQGSILDAQHRLRFQQEDPSYAPN 257 SS GR D + + EV + E + +QG + H + QE PS APN Sbjct: 997 SSTGGRNDEDSYTAPCQLEVDSMAQTKEVPSFEISEVQGDGI-VVHPISLDQE-PSNAPN 1054 Query: 258 GFRKV 272 FRK+ Sbjct: 1055 HFRKI 1059 >04_01_0410 - 5411135-5411581 Length = 148 Score = 29.5 bits (63), Expect = 1.5 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +3 Query: 276 VHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSP-AAQHQSDECGRSPPVP 437 +HN E E M +NR + + + +KK + K P +AQ C + P P Sbjct: 81 MHNFLEKETTMPRNRYWRTSVKSPIPAKKSEQPAQKKPSSAQKSKKVCRKKPKTP 135 >05_01_0060 - 418559-418577,418655-418738,418857-418966,419467-419577, 419914-419992,420182-420264,420347-420439,420902-421810 Length = 495 Score = 29.1 bits (62), Expect = 2.0 Identities = 17/36 (47%), Positives = 24/36 (66%) Frame = +2 Query: 299 NLDDAKQEVLRRDRSRCLFEEAEADSWKEPSSSASE 406 +LD AK+ LR+ RSR L + +A + K SSS+SE Sbjct: 73 HLDRAKRRYLRKRRSR-LLPDPDATTAKPSSSSSSE 107 >08_01_0105 + 756998-757225,757311-758597 Length = 504 Score = 27.9 bits (59), Expect = 4.6 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -1 Query: 449 YSFSWDRRRAAAFVTLMLSCWALSTNQLPLLRRDTVSDLCAVLP 318 YSFSWD +R V L + L L + + S +C+++P Sbjct: 281 YSFSWDDKRVGTKVLLAKGFLRNRLHGLELYKAHSDSYICSLVP 324 >01_06_1148 - 34895562-34895690,34896339-34896464,34896579-34896906, 34897127-34897216,34897284-34897360,34897519-34897593, 34897862-34897980,34899240-34899363,34899427-34899477, 34899590-34899688,34900104-34900214 Length = 442 Score = 27.5 bits (58), Expect = 6.1 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = +3 Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSD-ECGRSP 428 P G V+VH KELE N Y GV K + + ++P + + + EC +P Sbjct: 322 PGGLLYVVVHEAKELEGKCNTN-PYVKLTFKGVEKKTKVVKENRNPRWKEEFEFECEETP 380 Query: 429 PVPGERINIIVL 464 +++++ VL Sbjct: 381 --ANDKLHVEVL 390 >04_04_0004 - 22089250-22089582,22090050-22090325,22090626-22091282, 22091367-22091603 Length = 500 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = -1 Query: 443 FSWDRRRAAAFVTLMLSCWALSTNQLPLLRRDTVSDLCAVLP 318 FSWD + A A V L +L RR +C +LP Sbjct: 283 FSWDNKLAGARVLLSRRALVNGDRRLDAFRRLAEDFICRILP 324 >03_05_0398 + 23790257-23790323,23791116-23791339,23792208-23792275, 23794738-23794980,23795108-23795237,23797235-23797954 Length = 483 Score = 27.1 bits (57), Expect = 8.1 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -3 Query: 282 CELGPYGIHWEHMTGLLVGTVT 217 C LG + HW+H T L+ +T Sbjct: 79 CILGYFAFHWDHATALISQALT 100 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,576,965 Number of Sequences: 37544 Number of extensions: 246500 Number of successful extensions: 866 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 840 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 866 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1011709100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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