Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30639
(488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 77 4e-14
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 77 4e-14
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 77 4e-14
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 77 4e-14
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 66 5e-11
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 46 5e-05
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 44 2e-04
BX000688-10|CAI18605.1| 899|Homo sapiens gamma-aminobutyric aci... 31 2.1
BX000688-9|CAI18606.1| 961|Homo sapiens gamma-aminobutyric acid... 31 2.1
BX000688-8|CAI18604.1| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
BC050532-1|AAH50532.2| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
BC042598-1|AAH42598.1| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
BC041332-1|AAH41332.1| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
AL662826-10|CAI17391.2| 899|Homo sapiens gamma-aminobutyric aci... 31 2.1
AL662826-9|CAI17390.1| 961|Homo sapiens gamma-aminobutyric acid... 31 2.1
AL662826-8|CAI17389.1| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
AL645936-9|CAI18016.1| 899|Homo sapiens gamma-aminobutyric acid... 31 2.1
AL645936-8|CAI18017.1| 961|Homo sapiens gamma-aminobutyric acid... 31 2.1
AL645936-7|CAI18015.1| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
AL031983-8|CAA21453.1| 961|Homo sapiens gamma-aminobutyric acid... 31 2.1
AL031983-7|CAA21454.1| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
AK223619-1|BAD97339.1| 844|Homo sapiens gamma-aminobutyric acid... 31 2.1
AJ225029-1|CAA12360.1| 844|Homo sapiens GABA-B receptor protein. 31 2.1
AJ225028-1|CAA12359.1| 961|Homo sapiens GABA-B receptor protein. 31 2.1
AJ012288-1|CAA09980.1| 961|Homo sapiens GABA-BR1 protein. 31 2.1
AJ012187-1|CAA09941.1| 899|Homo sapiens GABAB receptor, subunit... 31 2.1
AJ012186-1|CAA09940.1| 844|Homo sapiens GABAB receptor, subunit... 31 2.1
AJ012185-1|CAA09939.1| 961|Homo sapiens GABAB receptor, subunit... 31 2.1
AF099148-1|AAC98508.1| 961|Homo sapiens GABA-B1a receptor protein. 31 2.1
AB208790-1|BAD92027.1| 808|Homo sapiens gamma-aminobutyric acid... 31 2.1
AB065476-1|BAC05730.1| 866|Homo sapiens seven transmembrane hel... 31 2.1
BC110802-1|AAI10803.1| 169|Homo sapiens vimentin-type IF-associ... 29 6.5
BC142647-1|AAI42648.1| 331|Homo sapiens Unknown (protein for MG... 29 8.6
BC064425-1|AAH64425.1| 343|Homo sapiens high mobility group AT-... 29 8.6
BC050666-1|AAH50666.1| 343|Homo sapiens ZNHIT4 protein protein. 29 8.6
AB054538-1|BAB21111.1| 343|Homo sapiens PAPA-1 protein. 29 8.6
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 71 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 181
P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 10 PKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 76.6 bits (180), Expect = 4e-14
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLPMDSVRS*FTMLKSWK-S**CKTGSTAQRSLTVSLR 357
+RFKGQ LMPNIGYGSNKKT+HMLP + +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 358 RSGS*FVERAQQLSIRVTNAAARLRSQENE 447
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 70.1 bits (164), Expect = 4e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 374
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK I
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAI 111
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 71 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 181
P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 10 PKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 76.6 bits (180), Expect = 4e-14
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLPMDSVRS*FTMLKSWK-S**CKTGSTAQRSLTVSLR 357
+RFKGQ LMPNIGYGSNKKT+HMLP + +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 358 RSGS*FVERAQQLSIRVTNAAARLRSQENE 447
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 70.1 bits (164), Expect = 4e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 374
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK I
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAI 111
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 71 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 181
P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 10 PKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 76.6 bits (180), Expect = 4e-14
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLPMDSVRS*FTMLKSWK-S**CKTGSTAQRSLTVSLR 357
+RFKGQ LMPNIGYGSNKKT+HMLP + +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 358 RSGS*FVERAQQLSIRVTNAAARLRSQENE 447
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 70.1 bits (164), Expect = 4e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 374
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK I
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAI 111
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 71 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 181
P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 10 PKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 76.6 bits (180), Expect = 4e-14
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 181 QRFKGQYLMPNIGYGSNKKTRHMLPMDSVRS*FTMLKSWK-S**CKTGSTAQRSLTVSLR 357
+RFKGQ LMPNIGYGSNKKT+HMLP + +K + C A+ + VS +
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSK 106
Query: 358 RSGS*FVERAQQLSIRVTNAAARLRSQENE 447
+ VERA QL+IRVTN ARLRS+ENE
Sbjct: 107 NRKA-IVERAAQLAIRVTNPNARLRSEENE 135
Score = 70.1 bits (164), Expect = 4e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 252 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 374
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK I
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAI 111
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 66.5 bits (155), Expect = 5e-11
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +3
Query: 126 MTNLRGIGVNLEVLTTESAAIQGSILDAQHRLRF--QQEDPSYAPNGFRKVLVHNVKELE 299
M+ LR G N EVLTT I+G + + + ++ P+GF K LVHNVKELE
Sbjct: 1 MSKLRVTGGNTEVLTT--GFIEGLRARSMPNIGYGRNKKTKHILPSGFWKFLVHNVKELE 58
Query: 300 ILMMQNRKYCAEIAHGVSSKKRKLI 374
+L++ N+ YC EI H VSSK K I
Sbjct: 59 VLLVSNKSYCVEITHDVSSKNCKAI 83
Score = 47.2 bits (107), Expect = 3e-05
Identities = 31/81 (38%), Positives = 41/81 (50%)
Frame = +1
Query: 205 MPNIGYGSNKKTRHMLPMDSVRS*FTMLKSWKS**CKTGSTAQRSLTVSLRRSGS*FVER 384
MPNIGYG NKKT+H+LP + +K + S ++ +ER
Sbjct: 27 MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILER 86
Query: 385 AQQLSIRVTNAAARLRSQENE 447
A Q+ IRVTNA A L S E+E
Sbjct: 87 AAQVVIRVTNANASLHSAESE 107
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 46.4 bits (105), Expect = 5e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 71 PTIVKKRTKRFIRHQSDRYDKLKR 142
P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 10 PKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2
Query: 71 PTIVKKRTKRFIRHQSDRYDKLK 139
P IVKKRTK+FIRHQSDRY K+K
Sbjct: 10 PKIVKKRTKKFIRHQSDRYVKIK 32
>BX000688-10|CAI18605.1| 899|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 899
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 827 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 886
Query: 447 IN 452
++
Sbjct: 887 LS 888
>BX000688-9|CAI18606.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>BX000688-8|CAI18604.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>BC050532-1|AAH50532.2| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>BC042598-1|AAH42598.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>BC041332-1|AAH41332.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>AL662826-10|CAI17391.2| 899|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 899
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 827 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 886
Query: 447 IN 452
++
Sbjct: 887 LS 888
>AL662826-9|CAI17390.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>AL662826-8|CAI17389.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>AL645936-9|CAI18016.1| 899|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 899
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 827 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 886
Query: 447 IN 452
++
Sbjct: 887 LS 888
>AL645936-8|CAI18017.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>AL645936-7|CAI18015.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>AL031983-8|CAA21453.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>AL031983-7|CAA21454.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>AK223619-1|BAD97339.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor 1 isoform b precursor variant protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>AJ225029-1|CAA12360.1| 844|Homo sapiens GABA-B receptor protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>AJ225028-1|CAA12359.1| 961|Homo sapiens GABA-B receptor protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>AJ012288-1|CAA09980.1| 961|Homo sapiens GABA-BR1 protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>AJ012187-1|CAA09941.1| 899|Homo sapiens GABAB receptor, subunit 1c
protein.
Length = 899
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 827 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 886
Query: 447 IN 452
++
Sbjct: 887 LS 888
>AJ012186-1|CAA09940.1| 844|Homo sapiens GABAB receptor, subunit 1b
protein.
Length = 844
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 772 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 831
Query: 447 IN 452
++
Sbjct: 832 LS 833
>AJ012185-1|CAA09939.1| 961|Homo sapiens GABAB receptor, subunit 1a
protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>AF099148-1|AAC98508.1| 961|Homo sapiens GABA-B1a receptor protein.
Length = 961
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 889 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 948
Query: 447 IN 452
++
Sbjct: 949 LS 950
>AB208790-1|BAD92027.1| 808|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor 1 isoform c precursor variant protein.
Length = 808
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 736 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 795
Query: 447 IN 452
++
Sbjct: 796 LS 797
>AB065476-1|BAC05730.1| 866|Homo sapiens seven transmembrane helix
receptor protein.
Length = 866
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 267 KVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGER 446
++L +ELE ++ + + +E+ H + S+++ R P S R PP P +R
Sbjct: 749 RLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDR 808
Query: 447 IN 452
++
Sbjct: 809 LS 810
>BC110802-1|AAI10803.1| 169|Homo sapiens vimentin-type
IF-associated coiled-coil protein protein.
Length = 169
Score = 29.5 bits (63), Expect = 6.5
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Frame = +3
Query: 135 LRGIGVNLEVLTTESAAIQGSILDAQHRLRFQQEDPSYAPNGFRKVL--VHNVKELEILM 308
+R +L + +A ++ + A+ + Q E + R L + K+ EI
Sbjct: 9 IREANAHLAAVHRRAAELEARLDAAERTVHAQAERLALHDQQLRAALDELGRAKDREIAT 68
Query: 309 MQNRKYCAEIA-HGVSS---KKRKLIRGKSPAAQHQSDECGRSPPVPG 440
+Q + +E H + + ++ +LIR P A+ D C R PP+ G
Sbjct: 69 LQEQLMTSEATVHSLQATVHQRDELIRQLQPRAELLQDICRRRPPLAG 116
>BC142647-1|AAI42648.1| 331|Homo sapiens Unknown (protein for
MGC:164858) protein.
Length = 331
Score = 29.1 bits (62), Expect = 8.6
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -3
Query: 450 LFVLLGPEASGRIRHSDAELLGSFHESASASSKRHRERSLRSTSCFASSRFP-AL*HCEL 274
L + P+ S + + + GS E ++SSK +ERS +C S + P L L
Sbjct: 134 LVAAIAPKGSEKAAKASRSVAGSKKEKENSSSKSKKERSEGVGTC--SEKDPGVLQPVPL 191
Query: 273 GPYGIHWEHMTGLLVGTVTDVG 208
G G ++ G+ G V +G
Sbjct: 192 GGRGGQYDGSAGVDTGAVEPLG 213
>BC064425-1|AAH64425.1| 343|Homo sapiens high mobility group
AT-hook 1-like 4 protein.
Length = 343
Score = 29.1 bits (62), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 342 HGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGE 443
HGV KK K + K HQ ++ G + P P +
Sbjct: 20 HGVHKKKHKKHKKKHKKKHHQEEDAGPTQPSPAK 53
>BC050666-1|AAH50666.1| 343|Homo sapiens ZNHIT4 protein protein.
Length = 343
Score = 29.1 bits (62), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 342 HGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGE 443
HGV KK K + K HQ ++ G + P P +
Sbjct: 20 HGVHKKKHKKHKKKHKKKHHQEEDAGPTQPSPAK 53
>AB054538-1|BAB21111.1| 343|Homo sapiens PAPA-1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 342 HGVSSKKRKLIRGKSPAAQHQSDECGRSPPVPGE 443
HGV KK K + K HQ ++ G + P P +
Sbjct: 20 HGVHKKKHKKHKKKHKKKHHQEEDAGPTQPSPAK 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,801,253
Number of Sequences: 237096
Number of extensions: 1340028
Number of successful extensions: 8014
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 7868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8009
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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