Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30638
         (529 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p pro...   100   2e-21
AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,...   100   2e-21
AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,...   100   2e-21
AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,...   100   2e-21
AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p pro...    33   0.32 
AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB...    33   0.32 
AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA...    33   0.32 

>AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p
           protein.
          Length = 124

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 45/88 (51%), Positives = 62/88 (70%)
 Frame = -2

Query: 300 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 121
           K  P++ +   K   ++MGT D+R+DTRLNK +WSKG+R+ PF         RNDDEDS 
Sbjct: 37  KRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSP 96

Query: 120 HKLFTLVTYVPVASIKGLQTENVDASQE 37
           +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 97  NKLYTYVTYVPVSTFKNLQTENVESSDD 124



 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -3

Query: 407 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 255
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAE 51


>AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,
           isoform C protein.
          Length = 124

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 45/88 (51%), Positives = 62/88 (70%)
 Frame = -2

Query: 300 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 121
           K  P++ +   K   ++MGT D+R+DTRLNK +WSKG+R+ PF         RNDDEDS 
Sbjct: 37  KRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSP 96

Query: 120 HKLFTLVTYVPVASIKGLQTENVDASQE 37
           +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 97  NKLYTYVTYVPVSTFKNLQTENVESSDD 124



 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -3

Query: 407 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 255
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAE 51


>AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,
           isoform B protein.
          Length = 124

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 45/88 (51%), Positives = 62/88 (70%)
 Frame = -2

Query: 300 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 121
           K  P++ +   K   ++MGT D+R+DTRLNK +WSKG+R+ PF         RNDDEDS 
Sbjct: 37  KRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSP 96

Query: 120 HKLFTLVTYVPVASIKGLQTENVDASQE 37
           +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 97  NKLYTYVTYVPVSTFKNLQTENVESSDD 124



 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -3

Query: 407 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 255
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAE 51


>AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,
           isoform A protein.
          Length = 124

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 45/88 (51%), Positives = 62/88 (70%)
 Frame = -2

Query: 300 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 121
           K  P++ +   K   ++MGT D+R+DTRLNK +WSKG+R+ PF         RNDDEDS 
Sbjct: 37  KRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSP 96

Query: 120 HKLFTLVTYVPVASIKGLQTENVDASQE 37
           +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 97  NKLYTYVTYVPVSTFKNLQTENVESSDD 124



 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -3

Query: 407 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 255
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAE 51


>AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p
           protein.
          Length = 1838

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 374 SAINEVVTREYTVNLHKRLHGVGF-KKRAPRAIKEIRKFAENRWEL 240
           S+I+E VT EY  +LH   HG GF  K +   +   +++AE+ W L
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNL 599


>AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB,
           isoform B protein.
          Length = 1838

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 374 SAINEVVTREYTVNLHKRLHGVGF-KKRAPRAIKEIRKFAENRWEL 240
           S+I+E VT EY  +LH   HG GF  K +   +   +++AE+ W L
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNL 599


>AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA,
           isoform A protein.
          Length = 1838

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 374 SAINEVVTREYTVNLHKRLHGVGF-KKRAPRAIKEIRKFAENRWEL 240
           S+I+E VT EY  +LH   HG GF  K +   +   +++AE+ W L
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNL 599


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,136,758
Number of Sequences: 53049
Number of extensions: 431383
Number of successful extensions: 925
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)