Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30637
         (708 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1NS85 Cluster: Sensor protein; n=2; delta proteobacter...    35   2.3  
UniRef50_Q47JJ9 Cluster: Sensor protein; n=1; Dechloromonas arom...    33   5.2  
UniRef50_O74371 Cluster: Ubiquitin-protein ligase E3; n=1; Schiz...    33   5.2  
UniRef50_UPI0000D5755E Cluster: PREDICTED: similar to ribosomal ...    33   6.9  
UniRef50_Q4A7Y7 Cluster: ABC transporter permease protein; n=5; ...    33   9.1  
UniRef50_A6GAS4 Cluster: Serine/threonine protein kinase with WD...    33   9.1  
UniRef50_A5DQI1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.1  

>UniRef50_Q1NS85 Cluster: Sensor protein; n=2; delta proteobacterium
           MLMS-1|Rep: Sensor protein - delta proteobacterium
           MLMS-1
          Length = 537

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = -3

Query: 472 FEHRHFERTLRSVETHPGPLLSEGRLHKKH*SHCVARAALVIRRVERSALRVR 314
           F+HR  + ++R VE   GP+L EGR       H V+  A V R ++++ L ++
Sbjct: 212 FQHRRADGSIREVEVFAGPILLEGRSLLYSIVHDVSERARVERELKKAYLDLK 264


>UniRef50_Q47JJ9 Cluster: Sensor protein; n=1; Dechloromonas aromatica
            RCB|Rep: Sensor protein - Dechloromonas aromatica (strain
            RCB)
          Length = 1214

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 24/95 (25%), Positives = 37/95 (38%)
 Frame = +1

Query: 307  DEYERVTRNAQRDGSRARHEPRNVINVFYAAGPQTGVVLDVSPRTAMCVRNVDVQMCPAV 486
            +E +R   +   D      EP N+INV     P        +P     V+ + +   P +
Sbjct: 1047 EERQRAAASGMNDFLTKPIEPANLINVIQRWRPTPVRAETTAPAPLQAVKPIQIPDIPGI 1106

Query: 487  HTMTRS*RVLHRPASQVIPRAEFGTRWIVRGGRGR 591
                   R+L+RPA       +F TR+I    R R
Sbjct: 1107 DVTAGLHRMLNRPALYEKVLRDFHTRFIGEADRIR 1141


>UniRef50_O74371 Cluster: Ubiquitin-protein ligase E3; n=1;
           Schizosaccharomyces pombe|Rep: Ubiquitin-protein ligase
           E3 - Schizosaccharomyces pombe (Fission yeast)
          Length = 340

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +3

Query: 384 CFLCSRPSDRSGPGCVSTDRNVRSKCRCSNVSCSSHYDAQLTRSSSTREPSDPSCRIRHQ 563
           C++C    D+    C  ++ + R  CRCS ++  S   + +TRS STR    P C   ++
Sbjct: 14  CWICYEEYDKKL--CSLSNDSWRRPCRCSLIAHESCLISYITRSGSTR---CPQCLTAYR 68

Query: 564 VDRP--RRTW 587
           + +P   ++W
Sbjct: 69  IAKPPKEKSW 78


>UniRef50_UPI0000D5755E Cluster: PREDICTED: similar to ribosomal
            protein S6 kinase, 90kDa, polypeptide 5 isoform a; n=2;
            Endopterygota|Rep: PREDICTED: similar to ribosomal
            protein S6 kinase, 90kDa, polypeptide 5 isoform a -
            Tribolium castaneum
          Length = 928

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 19/65 (29%), Positives = 36/65 (55%)
 Frame = +2

Query: 47   SSSSILNND*YNVNNRITKPRRQKFIYTRTRYAHAKHNARAREVRRDYENFEITIKHF*I 226
            SSS I+ +D  +V+ ++   +RQK +Y +TR++      + +E+  D     + +KH   
Sbjct: 838  SSSGIVMSDKNSVDTKVVGRKRQKKVYVQTRWSERIRRRQRQEIDLD----PVPVKHNRK 893

Query: 227  RRRDE 241
            R+ DE
Sbjct: 894  RKVDE 898


>UniRef50_Q4A7Y7 Cluster: ABC transporter permease protein; n=5;
           Mycoplasma hyopneumoniae|Rep: ABC transporter permease
           protein - Mycoplasma hyopneumoniae (strain 7448)
          Length = 279

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 20/68 (29%), Positives = 37/68 (54%)
 Frame = -3

Query: 295 FFLIKI*PKTTITNAFR*LVSPTDLKMFYCYFKIFIITSNLSGARVMFSVRVASSRVYEF 116
           FFL KI  K +I   F+ ++ P   K+   Y+ + I T+  +    ++   + S+R ++ 
Sbjct: 173 FFLAKI-DKLSIFTKFKLIIFP---KIKISYYLLIIFTTIQAWNDFLWPNYIFSNRSFQT 228

Query: 115 LSSWFRYS 92
           +S+WF YS
Sbjct: 229 ISTWFHYS 236


>UniRef50_A6GAS4 Cluster: Serine/threonine protein kinase with WD40
           repeats; n=2; Plesiocystis pacifica SIR-1|Rep:
           Serine/threonine protein kinase with WD40 repeats -
           Plesiocystis pacifica SIR-1
          Length = 1184

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +1

Query: 310 EYERVTRNAQRDGSRARHEPRNVINVFYAAGPQTGVVLDVSPR-TAMCVRNVDVQMCPAV 486
           E ER  R    DG+RAR   R  ++V     P  GVV  V    TA+ +R V+ +     
Sbjct: 389 ERERGLRQLSDDGARARDAAR--MSVARRYRPGRGVVEHVDATVTALLLREVETEARDGA 446

Query: 487 HTMTRS*RVLHRPASQVIPR 546
             ++ +  VL  P S+VI R
Sbjct: 447 AWISAANEVLGEPVSEVILR 466


>UniRef50_A5DQI1 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 181

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +3

Query: 426 CVSTDRNVRSKCRCSNVSCSSHYDA-QLTRSSSTREPSDPSCRIRHQVDRPRRTWTPFIF 602
           CV+   N     RC  + C  H  A +  R SSTR  +  + R  H      R W P I 
Sbjct: 50  CVNPPSNSILVGRCMRLICPDHLHAVRSCRPSSTRARATTTARDAHHATAGTRRWCPLIL 109

Query: 603 I 605
           +
Sbjct: 110 M 110


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,037,357
Number of Sequences: 1657284
Number of extensions: 13095412
Number of successful extensions: 34533
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34521
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)