Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30635
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 121 2e-26
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 102 7e-21
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 94 2e-18
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 93 6e-18
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 89 9e-17
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 88 2e-16
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 88 2e-16
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 83 5e-15
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 76 7e-13
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 76 7e-13
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 73 5e-12
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 71 4e-11
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 69 1e-10
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 68 2e-10
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 60 5e-08
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 45 0.002
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 42 0.019
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 40 0.043
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 40 0.057
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 40 0.075
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 40 0.075
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 38 0.23
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 35 1.6
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 35 2.1
UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma pro... 34 3.7
UniRef50_Q6QR24 Cluster: Chromosome-associated protein G; n=2; T... 34 3.7
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 33 4.9
UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n... 33 6.5
UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putati... 33 8.6
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 121 bits (291), Expect = 2e-26
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR
Sbjct: 62 PTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYR 121
Query: 338 ARLILFP-KGKKVLKGEANEEERKLATQL 255
++LILFP K KG+++ EE KLATQL
Sbjct: 122 SKLILFPRKPSAPKKGDSSAEELKLATQL 150
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/59 (54%), Positives = 37/59 (62%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTV 509
N M+ HFHKDWQR V TWFNQPAR+ RR++ R P+RPIVRCPTV
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTV 64
Score = 66.5 bits (155), Expect = 6e-10
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = -2
Query: 255 SGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVT 76
+GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVE 208
Query: 75 K 73
K
Sbjct: 209 K 209
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 102 bits (245), Expect = 7e-21
Identities = 51/88 (57%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+ K R GRGF+L E++AAG+ P +ARTIGI VD RR+NKS E + INVQR+K Y
Sbjct: 77 PTVRYNMKRRLGRGFSLEELKAAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQRLKTYM 136
Query: 338 ARLILFP-KGKKVLKGEANEEERKLATQ 258
++L+LFP KK KG+A EEE K ATQ
Sbjct: 137 SKLVLFPLNRKKPQKGDATEEEVKAATQ 164
Score = 42.7 bits (96), Expect = 0.008
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -1
Query: 688 GNNMIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPI 527
GNN IP+ H K W VK +FNQPA++ RR++ R+ LRP
Sbjct: 15 GNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRL-LKAKKIFPRPLKALRPQ 73
Query: 526 VRCPTV 509
V CPTV
Sbjct: 74 VNCPTV 79
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/68 (60%), Positives = 56/68 (82%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+TK+R+GRGFT+ E++AAGL +AR++GI VD RRRNKS ESL++NV+RIK Y+
Sbjct: 61 PTLRYNTKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQ 120
Query: 338 ARLILFPK 315
ARL++ PK
Sbjct: 121 ARLVVIPK 128
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/59 (45%), Positives = 33/59 (55%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTV 509
NN++ N HF KDWQR VK WF+QP + RR+ R LRP VRCPT+
Sbjct: 6 NNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPTL 63
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 93.1 bits (221), Expect = 6e-18
Identities = 44/85 (51%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = -3
Query: 506 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 327
Y+ KVRAG+GFTL E++ AG+ A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+L+
Sbjct: 64 YNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLV 123
Query: 326 LFP-KGKKVLKGEANEEERKLATQL 255
+FP + ++V G++ EE ATQ+
Sbjct: 124 VFPRRSRQVKAGDSTPEELANATQV 148
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/65 (47%), Positives = 37/65 (56%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTVG 506
NN+IP+ HF K WQ +VKTWFNQPAR+ RR+ R PLRP+V G
Sbjct: 4 NNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVH----G 59
Query: 505 TILKY 491
LKY
Sbjct: 60 QTLKY 64
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -2
Query: 252 GPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDA 100
G MP+ +T D K FKAY +R R+ A+ G RAKR +A
Sbjct: 150 GDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAGARAKRAAEA 200
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 89.0 bits (211), Expect = 9e-17
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P+ Y +KVRAGRGFT +E++ AG++ +AR+ G+AVDPRRRN+ ES+ N+QR+ EY+
Sbjct: 60 PSERYKSKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYK 119
Query: 338 ARLILFPKGK-KVLK 297
+RLI P K KVLK
Sbjct: 120 SRLIFLPDSKNKVLK 134
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/58 (51%), Positives = 35/58 (60%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPT 512
NNMIPNGHFHK WQ+ VK WFNQP ++ RRK R LRP+V CP+
Sbjct: 5 NNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHCPS 61
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = -3
Query: 521 MPNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEY 342
MP+ Y+ K+R GRGFTL+E++ AGL AR++G+AVD RR NK ESL +NV R+K Y
Sbjct: 59 MPSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTY 118
Query: 341 RARLILFPKGKKVLKGEA 288
++L+LFP+ K KG A
Sbjct: 119 LSKLVLFPRKKHAKKGFA 136
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 87.8 bits (208), Expect = 2e-16
Identities = 42/86 (48%), Positives = 60/86 (69%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+ KVRAGRGFTL E++A G+ P +ARTIGI+VD RR+NKS E+ NV R++EY+
Sbjct: 61 PTVKYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYK 120
Query: 338 ARLILFPKGKKVLKGEANEEERKLAT 261
++L++F K K + + E+ AT
Sbjct: 121 SKLVIFDKKTKASEVASFEQVDVSAT 146
Score = 41.9 bits (94), Expect = 0.014
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = -2
Query: 240 PVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAE 94
PV+QPAP+S R + E+ AY+ LR AR+ K GIR KR K+ AE
Sbjct: 148 PVEQPAPESGLRAVEVPEQT--AYRTLRLARNEKKYKGIREKRAKEKAE 194
Score = 41.5 bits (93), Expect = 0.019
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -1
Query: 670 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTV 509
N HF K WQ V+ F+Q ++ R+Q+R+ LRP+VR PTV
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRL-RKAAKIAPRPIDALRPVVRAPTV 63
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+ +VR GRGFTL E++ AG+ ART+GIAVD RR N S ESL NV R+K+Y+
Sbjct: 78 PTVKYNRRVRVGRGFTLAELKEAGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYK 137
Query: 338 ARLILFPK 315
ARLILFP+
Sbjct: 138 ARLILFPR 145
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -1
Query: 661 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTV 509
FHKDWQR V+ F+QP R++RR++ R+ LRP+VRCPTV
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARL-AKAAAVAPRPVDKLRPVVRCPTV 80
Score = 33.1 bits (72), Expect = 6.5
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -2
Query: 267 GYTAS-GPLMPVQQPAPKSVARPITEDEK---NFKAYQYLRGARSIAKLVGIRAKRLKDA 100
GYT G + P++ + + DE AY+ LR RS A+ GIR KR K
Sbjct: 175 GYTTKLGAIFPIKNISAAEAVTEVKRDELPKGEEAAYRRLRETRSEARYKGIREKRAKAK 234
Query: 99 AENPDDVTK 73
AE K
Sbjct: 235 AEEESAAKK 243
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 76.2 bits (179), Expect = 7e-13
Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+ K R GRGFTL E+ A G+N A +IGIAVD RR + S E+ QINV R+K+Y
Sbjct: 59 PTQRYNMKTRLGRGFTLEELSACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYI 118
Query: 338 ARLILFP-KGKKVLKGEA 288
++L P KGKK KG A
Sbjct: 119 NGIVLQPRKGKKTKKGFA 136
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPT 512
NN+IPN H+HK+++R++KTW+NQP R+ R+ R LRPIV PT
Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPT 60
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Frame = -3
Query: 506 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 327
Y++ + GRGF+L E++ AGLN FART+GI+VD RRRN + E L NV+R+K Y ++L+
Sbjct: 63 YNSVQKLGRGFSLIELKEAGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSKLV 122
Query: 326 LFPK--GKK---VLKGEANE 282
L+P+ GK V+K NE
Sbjct: 123 LYPRVAGKPKNGVVKDSTNE 142
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTV 509
N +PN H K W RFVKT++NQPA + RR+Q R LRP+VR T+
Sbjct: 4 NQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQTI 61
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P YHTKVR GRGF+L EIR AG++ ARTI I+VDP+++ K E + +R+ E
Sbjct: 20 PTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKKKKERKKEKNERVTETN 79
Query: 338 ARLILFPKGKKVLKGEANEEERK 270
+ I++PK +K + + +E +K
Sbjct: 80 QKDIIYPKREKEREKKGMKEGKK 102
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = -3
Query: 506 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 327
++ K+R GRGF+L+E+RAA ++ ARTIGIAVDPRR+ S E L N QR+ EY RL
Sbjct: 63 FNYKLRLGRGFSLKELRAAKIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLC 122
Query: 326 LFPKGKKVL 300
L K++
Sbjct: 123 LKSVSVKIV 131
Score = 35.9 bits (79), Expect = 0.93
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 661 FHKDWQRFVKTWFNQPARRYRRKQNRI 581
F KDW+ V TW QP R+ RR Q R+
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRV 38
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+ K R G+GFTL EI+A L P AR+IGI VD RR+N+ ESL+ N +R+++Y
Sbjct: 60 PTQRYNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYL 119
Query: 338 ARLILFPKGK 309
L++ P K
Sbjct: 120 NSLVMIPLKK 129
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPT 512
NN++PN H HK WQR+V+ FN+ +R +R+ R L P+V CPT
Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPT 61
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+ K R GRGFT +E+ AAG +P AR GIAVD RR + ++ NV+R++ Y+
Sbjct: 82 PTVRYNMKTRLGRGFTPKELVAAGFDPALARFQGIAVDARRAHSKDAMVKQNVERLQAYK 141
Query: 338 ARLILFPKGKKV 303
ARLI KG+ V
Sbjct: 142 ARLIKVKKGETV 153
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/59 (49%), Positives = 32/59 (54%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXPLRPIVRCPTV 509
NN IPN H K W VKT+F+ PAR RR+ R PLRPIVRCPTV
Sbjct: 26 NNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTV 84
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 339
P Y+ R GRGFT E AGL+ AR +GIAVD RRR+ + E+ NV+RIK Y
Sbjct: 58 PTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLRRRDTNQEAFDKNVERIKTYL 117
Query: 338 ARLILFPKGKKVLKGEANEEERKL 267
++ ++ K+ + A +++
Sbjct: 118 GKITIYESVKEARESGAKPYTKEI 141
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 59.7 bits (138), Expect = 7e-08
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 676 IPNGHFHKDWQRFVKTWFNQPARRYRRK 593
+PN HFHKDWQR+VKTWFNQP R+ RR+
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -1
Query: 685 NNMIPNGHFHKDWQRFVKTWFNQPARRYRR 596
N MI HFHKDWQR V TWFNQPAR+ RR
Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = -3
Query: 494 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK---SVESLQINVQRIKE 345
VR GRGF+L E+ AGL+ AR +G+ VD RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 41.5 bits (93), Expect = 0.019
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = -3
Query: 497 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 327
K++ GRGF++ EI+A L AR +GI VD RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 40.3 bits (90), Expect = 0.043
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -3
Query: 491 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 330
R GRGF++ E+ AGLN AR +GI VD RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 39.9 bits (89), Expect = 0.057
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = -3
Query: 494 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 330
+R GRGF+ +E+ A GL+ A+ +G+ +D RRR + NVQ +++Y ++
Sbjct: 27 LRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH----EWNVQALRDYLTKI 77
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 39.5 bits (88), Expect = 0.075
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 667 GHFHKDWQRFVKTWFNQPARRY-RRKQNRIXXXXXXXXXXXXXPLRPIVRCPT 512
GHF K W+ V T FNQP + RRK + L+P+V+CPT
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPT 62
Score = 39.5 bits (88), Expect = 0.075
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = -3
Query: 518 PNCWYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSV 381
P ++TK++ GRGF+++EI+ + + A + GI++D RR+ ++
Sbjct: 61 PTRMHNTKIKLGRGFSIQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 39.5 bits (88), Expect = 0.075
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = -3
Query: 494 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRN---KSVESLQINVQRIKEY 342
++ GRGF+ E++A GL AR +GI VD RR+ ++VE+L+ ++ +KE+
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPENVEALRSWLKALKEH 83
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -3
Query: 497 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 369
K + GRGF++ E+RA GL+ AR +GI VD RR ++++
Sbjct: 22 KWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/49 (26%), Positives = 34/49 (69%)
Frame = -3
Query: 491 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKE 345
+ G+GF+L+E++ +G + A+ + + +D RR+ E++++ ++++KE
Sbjct: 21 KIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVEV-LKKLKE 68
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 34.7 bits (76), Expect = 2.1
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = -3
Query: 497 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEY 342
K+R GRGF+ E+ A GL+ A +GI +D RR K+V + NV+ +K++
Sbjct: 42 KMRRGRGFSKGELEAVGLDFKKALKMGIPIDKRR--KTVH--EWNVEALKKW 89
>UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Beta-glucosidase - marine
gamma proteobacterium HTCC2080
Length = 824
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 494 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 327
V A G T RE++A G++ +FA T+ +A D R ++ ES + Q + Y ++
Sbjct: 153 VAAISGATAREVKATGIDWIFAPTVAVAQD-YRWGRTYESYSSDPQVVSSYAGGMV 207
>UniRef50_Q6QR24 Cluster: Chromosome-associated protein G; n=2;
Trypanosoma cruzi|Rep: Chromosome-associated protein G -
Trypanosoma cruzi
Length = 1080
Score = 33.9 bits (74), Expect = 3.7
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = -3
Query: 569 GRSSTSCSWAVTSYSAMPNCWYHTKVRAGRGFTLREI---RAAGLNPVFARTIGIAVDPR 399
G S TS S + +A+ NCW H R G + E+ GL P A + I + R
Sbjct: 262 GLSDTSSSVVIACRAALTNCWLHRDYR-DDGEAMLELVLDGGGGLEPYEAISTEILLYCR 320
Query: 398 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEE 276
++ K+ ++ +N + + A L+L+ K+L ++E
Sbjct: 321 KQ-KNTKTYLVNTESVS--AASLLLWKASAKLLADAEGDDE 358
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 33.5 bits (73), Expect = 4.9
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -3
Query: 668 WTFPQGLAKIC*NLV*PASSTIPQKAK*NKEG*GRSSTSCSWAVTSYSAMPNCWYHTKVR 489
W+ + LA++C ++V PA +K K+ S + Y+ KV
Sbjct: 9 WSLQKALAELCQDMVQPACQENQKKNCEEKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVS 68
Query: 488 AGRGFTLREIRAAGL 444
+GFTL E++AAG+
Sbjct: 69 TXKGFTLEELKAAGI 83
>UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n=1;
Streptomyces exfoliatus|Rep: Poly(3-hydroxybutyrate)
depolymerase - Streptomyces exfoliatus (Streptomyces
hydrogenans)
Length = 488
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 354 SLNIDLQ*FNRLVASTGIYSNSNRSGKYWVQSCGPNFTKSESS 482
++N DL + R + +Y NS+ SG WV GPN S +S
Sbjct: 143 AVNDDLATYYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTS 185
>UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putative;
n=6; Plasmodium|Rep: Nucleolar GTP-binding protein 1,
putative - Plasmodium chabaudi
Length = 682
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 407 DPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEAN 285
DP R+ + +S +QR K Y+ ++ + + KK KGEA+
Sbjct: 618 DPTRKMRIYQSTSTEIQRKKAYKLNIVAYRQIKKGTKGEAD 658
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,960,717
Number of Sequences: 1657284
Number of extensions: 11645427
Number of successful extensions: 31601
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 30671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31579
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -