Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30634
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 144 1e-33
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 109 4e-23
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 108 8e-23
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 108 8e-23
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 107 1e-22
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 107 2e-22
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 106 3e-22
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 103 2e-21
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 100 2e-20
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 90 4e-17
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 88 2e-16
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 87 4e-16
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 86 7e-16
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 84 2e-15
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 82 8e-15
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 56 6e-07
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 54 3e-06
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 48 2e-04
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 45 0.002
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 43 0.006
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 42 0.014
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 42 0.014
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 42 0.014
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 40 0.032
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 40 0.032
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 40 0.032
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 39 0.075
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.099
UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma pro... 35 1.2
UniRef50_UPI0000EBCD3E Cluster: PREDICTED: similar to Chain A, S... 34 2.1
UniRef50_UPI0000F1D628 Cluster: PREDICTED: similar to mitotic ce... 33 4.9
UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n... 33 4.9
UniRef50_Q1CZH8 Cluster: Amine oxidase, flavin-containing; n=1; ... 33 4.9
UniRef50_O45107 Cluster: Skp1 related (Ubiquitin ligase complex ... 33 6.5
UniRef50_Q49629 Cluster: Lepb1170_F1_46; n=1; Mycobacterium lepr... 32 8.6
UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like; n... 32 8.6
UniRef50_P55541 Cluster: Uncharacterized short-chain type dehydr... 32 8.6
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 144 bits (350), Expect = 1e-33
Identities = 65/85 (76%), Positives = 77/85 (90%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KA+ +APRPA+GP+RPIVRCPTVRYHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 42 KARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Query: 181 RRNKSVESLQINVQRIKEYRARLIL 255
RRNKS ESLQ NVQR+KEYR++LIL
Sbjct: 102 RRNKSTESLQANVQRLKEYRSKLIL 126
Score = 85.4 bits (202), Expect = 9e-16
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +3
Query: 279 KGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIR 458
KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIR
Sbjct: 136 KGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
Query: 459 AKRLKDAAENPDDVTK 506
AKR K+AAE DV K
Sbjct: 196 AKRAKEAAE--QDVEK 209
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 109 bits (263), Expect = 4e-23
Identities = 52/88 (59%), Positives = 69/88 (78%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KA + RP LRP VRCPT+RY+TK+R+GRGFT+ E++AAGL +AR++GI VD R
Sbjct: 42 KAAKLGLRPVQ-LLRPAVRCPTLRYNTKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHR 100
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRK 264
RRNKS ESL++NV+RIK Y+ARL++ K
Sbjct: 101 RRNKSEESLKLNVERIKAYQARLVVIPK 128
Score = 32.3 bits (70), Expect = 8.6
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 228 KGIQSASHTFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKA 407
K Q+ PK K K + + A + ++P+ R IT +EK F A
Sbjct: 117 KAYQARLVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTEAEKPRAITSEEKEFNA 176
Query: 408 YQYLRGARSIAKLVG-IRAKRLKDAAE 485
Y+ LR AR + G ++A+ K E
Sbjct: 177 YETLRKARGTHRAAGKVKARIAKKEEE 203
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 108 bits (260), Expect = 8e-23
Identities = 51/90 (56%), Positives = 66/90 (73%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
+AK +APRPA GPLRPIVRCPTVRY+ K R GRGFT +E+ AAG +P AR GIAVD R
Sbjct: 62 RAKKIAPRPAEGPLRPIVRCPTVRYNMKTRLGRGFTPKELVAAGFDPALARFQGIAVDAR 121
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRKAK 270
R + ++ NV+R++ Y+ARLI +K +
Sbjct: 122 RAHSKDAMVKQNVERLQAYKARLIKVKKGE 151
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 108 bits (260), Expect = 8e-23
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KA AVAPRP LRP+VRCPTV+Y+ +VR GRGFTL E++ AG+ ART+GIAVD R
Sbjct: 59 KAAAVAPRPV-DKLRPVVRCPTVKYNRRVRVGRGFTLAELKEAGIPKKLARTVGIAVDHR 117
Query: 181 RRNKSVESLQINVQRIKEYRARLIL 255
R N S ESL NV R+K+Y+ARLIL
Sbjct: 118 RVNYSKESLVANVARLKDYKARLIL 142
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 107 bits (258), Expect = 1e-22
Identities = 50/88 (56%), Positives = 68/88 (77%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KA +APRP LRP+VR PTV+Y+ KVRAGRGFTL E++A G+ P +ARTIGI+VD R
Sbjct: 42 KAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHR 100
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRK 264
R+NKS E+ NV R++EY+++L++ K
Sbjct: 101 RQNKSQETFDANVARLQEYKSKLVIFDK 128
Score = 41.9 bits (94), Expect = 0.011
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +3
Query: 339 PVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAE 485
PV+QPAP+S R + E+ AY+ LR AR+ K GIR KR K+ AE
Sbjct: 148 PVEQPAPESGLRAVEVPEQT--AYRTLRLARNEKKYKGIREKRAKEKAE 194
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 107 bits (256), Expect = 2e-22
Identities = 51/85 (60%), Positives = 64/85 (75%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KAK + PRP LRP V CPTVRY+ K R GRGF+L E++AAG+ P +ARTIGI VD R
Sbjct: 58 KAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSLEELKAAGVKPRYARTIGIRVDRR 116
Query: 181 RRNKSVESLQINVQRIKEYRARLIL 255
R+NKS E + INVQR+K Y ++L+L
Sbjct: 117 RKNKSEEGMNINVQRLKTYMSKLVL 141
Score = 38.3 bits (85), Expect = 0.13
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Frame = +3
Query: 267 KKVLKGEANEEERKLATQLR-----GPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGAR 431
KK KG+A EEE K ATQ R + + PA + R +TE+E K Y++L+
Sbjct: 147 KKPQKGDATEEEVKAATQDRSRYGTAAVGGLVTPA-REAPRKVTEEESTKKMYKFLKKNH 205
Query: 432 SIAKLVGIRAKRL--KDAAEN 488
S + R +R K+A EN
Sbjct: 206 SAVRFFRARNRRAARKEAKEN 226
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 106 bits (255), Expect = 3e-22
Identities = 48/91 (52%), Positives = 68/91 (74%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KA + PRP +GPLRP+V T++Y+ KVRAG+GFTL E++ AG+ A TIGI+VD R
Sbjct: 40 KAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHR 99
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRKAKR 273
R+N+S+E LQ NVQR+K Y+A+L++ + R
Sbjct: 100 RKNRSLEGLQSNVQRLKTYKAKLVVFPRRSR 130
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 FPKGKKVLK-GEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGAR 431
FP+ + +K G++ EE ATQ++G MP+ +T D K FKAY +R R
Sbjct: 125 FPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLER 184
Query: 432 SIAKLVGIRAKRLKDA 479
+ A+ G RAKR +A
Sbjct: 185 TNARHAGARAKRAAEA 200
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 103 bits (248), Expect = 2e-21
Identities = 46/90 (51%), Positives = 68/90 (75%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
K++ +AP+P LRP+V CP+ RY +KVRAGRGFT +E++ AG++ +AR+ G+AVDPR
Sbjct: 41 KSRQLAPKPTE-LLRPLVHCPSERYKSKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPR 99
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRKAK 270
RRN+ ES+ N+QR+ EY++RLI +K
Sbjct: 100 RRNRCTESIAANIQRLIEYKSRLIFLPDSK 129
Score = 32.3 bits (70), Expect = 8.6
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 360 KSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKR 467
K A + E+EK F+A+ LR AR K GIR KR
Sbjct: 150 KVKALKVGEEEKKFEAFVTLRRARCDEKFAGIRMKR 185
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 100 bits (240), Expect = 2e-20
Identities = 47/96 (48%), Positives = 67/96 (69%)
Frame = +1
Query: 13 VAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK 192
+AP+PA+ P+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+++ K
Sbjct: 4 IAPQPASSPIRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKK 63
Query: 193 SVESLQINVQRIKEYRARLILSRKAKRC*RVRPMKK 300
E + +R+ E + I+ K ++ + MK+
Sbjct: 64 KKERKKEKNERVTETNQKDIIYPKREKEREKKGMKE 99
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 89.8 bits (213), Expect = 4e-17
Identities = 45/90 (50%), Positives = 61/90 (67%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KA A P G LRP+V P+ RY+ K+R GRGFTL+E++ AGL AR++G+AVD R
Sbjct: 41 KAAASGLTPT-GYLRPLVHMPSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHR 99
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRKAK 270
R NK ESL +NV R+K Y ++L+L + K
Sbjct: 100 RTNKCAESLNLNVNRLKTYLSKLVLFPRKK 129
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 87.8 bits (208), Expect = 2e-16
Identities = 42/85 (49%), Positives = 62/85 (72%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
+A + +PRP LRP+VR T++Y++ + GRGF+L E++ AGLN FART+GI+VD R
Sbjct: 40 QALSASPRPVE-LLRPVVRGQTIKYNSVQKLGRGFSLIELKEAGLNAAFARTVGISVDHR 98
Query: 181 RRNKSVESLQINVQRIKEYRARLIL 255
RRN + E L NV+R+K Y ++L+L
Sbjct: 99 RRNLNQEELNNNVKRLKAYLSKLVL 123
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 86.6 bits (205), Expect = 4e-16
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KA A A G LRPIV PT RY+ K R GRGFTL E+ A G+N A +IGIAVD R
Sbjct: 39 KAVAEAGFRPVGMLRPIVHPPTQRYNMKTRLGRGFTLEELSACGINKKAAMSIGIAVDHR 98
Query: 181 RRNKSVESLQINVQRIKEYRARLILS-RKAKR 273
R + S E+ QINV R+K+Y ++L RK K+
Sbjct: 99 RTDLSEETFQINVDRLKKYINGIVLQPRKGKK 130
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 85.8 bits (203), Expect = 7e-16
Identities = 44/90 (48%), Positives = 57/90 (63%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KAKA+ P P LRPIVRCPT++Y+ R GRGFT E AGL+ AR +GIAVD R
Sbjct: 39 KAKALFPMPLK-KLRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLR 97
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRKAK 270
RR+ + E+ NV+RIK Y ++ + K
Sbjct: 98 RRDTNQEAFDKNVERIKTYLGKITIYESVK 127
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 84.2 bits (199), Expect = 2e-15
Identities = 46/100 (46%), Positives = 61/100 (61%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
KAK+V P L+P V C R++ K+R GRGF+L+E+RAA ++ ARTIGIAVDPR
Sbjct: 40 KAKSVFPATIKS-LKPSVHCMNQRFNYKLRLGRGFSLKELRAAKIDKNLARTIGIAVDPR 98
Query: 181 RRNKSVESLQINVQRIKEYRARLILSRKAKRC*RVRPMKK 300
R+ S E L N QR+ EY RL L + + R + K
Sbjct: 99 RKESSKECLTRNAQRLTEYMNRLCLKSVSVKIVLTRDVSK 138
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 82.2 bits (194), Expect = 8e-15
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +1
Query: 40 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 219
L P+V CPT RY+ K R G+GFTL EI+A L P AR+IGI VD RR+N+ ESL+ N
Sbjct: 53 LHPVVHCPTQRYNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENA 112
Query: 220 QRIKEYRARLIL 255
+R+++Y L++
Sbjct: 113 ERLQKYLNSLVM 124
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 56.0 bits (129), Expect = 6e-07
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 135
KA + PRP +GPLRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 39 KAVKIFPRPTSGPLRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 53.6 bits (123), Expect = 3e-06
Identities = 20/53 (37%), Positives = 39/53 (73%)
Frame = +1
Query: 40 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSV 198
L+P+V+CPT ++TK++ GRGF+++EI+ + + A + GI++D RR+ ++
Sbjct: 54 LKPLVKCPTRMHNTKIKLGRGFSIQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 37 PLRPIVRCPTVRYH----TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVES 204
P PIVR P +R H +R GRGF+ +E+ A GL+ A+ +G+ +D RRR
Sbjct: 7 PPEPIVRKPMLRKHGGLSPGLRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH--- 63
Query: 205 LQINVQRIKEYRARL 249
+ NVQ +++Y ++
Sbjct: 64 -EWNVQALRDYLTKI 77
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +1
Query: 85 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK---SVESLQINVQRIKE 234
VR GRGF+L E+ AGL+ AR +G+ VD RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 42.7 bits (96), Expect = 0.006
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = -1
Query: 185 RLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 18
++R S VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 388 KIRVSLTTLAVRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 41.5 bits (93), Expect = 0.014
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +1
Query: 1 KAKAVAPRPAAGPLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 180
+ + V RP A L P++R + K+R GRGF+ E+ A GL+ A +GI +D R
Sbjct: 16 RGREVEERPVAYVLTPVLRKDAGK-KPKMRRGRGFSKGELEAVGLDFKKALKMGIPIDKR 74
Query: 181 RRNKSVESLQINVQRIKEY 237
R K+V + NV+ +K++
Sbjct: 75 R--KTVH--EWNVEALKKW 89
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 41.5 bits (93), Expect = 0.014
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 43 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 210
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD RR ++++
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +1
Query: 82 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 252
K++ GRGF++ EI+A L AR +GI VD RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 40.3 bits (90), Expect = 0.032
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 37 PLRPIVRCPTVRYHTKV-----RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRN---K 192
P PIV +R + V + GRGF+ E++A GL AR +GI VD RR+ +
Sbjct: 9 PPEPIVNAVKLRRYGGVPPRPLKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPE 68
Query: 193 SVESLQINVQRIKEY 237
+VE+L+ ++ +KE+
Sbjct: 69 NVEALRSWLKALKEH 83
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 40.3 bits (90), Expect = 0.032
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 40 LRPIVRCPTVRYHTK---VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 210
+ PIV+ P R+ + + G+GF+L+E++ +G + A+ + + +D RR+ E+++
Sbjct: 2 VEPIVKRPHYRFEIRKKDTKIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVE 61
Query: 211 INVQRIKE 234
+ ++++KE
Sbjct: 62 V-LKKLKE 68
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 40.3 bits (90), Expect = 0.032
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 88 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 249
R GRGF++ E+ AGLN AR +GI VD RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 39.1 bits (87), Expect = 0.075
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +3
Query: 240 SASHTFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYL 419
+A T PKGKK K A EEE +A Q+ P+ PV K V ++E++K YQ L
Sbjct: 291 TAWETVPKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQIL 348
Query: 420 R 422
+
Sbjct: 349 Q 349
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.099
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 46 PIVRCPTVRYHTKVRAGRGFTLREIR 123
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Beta-glucosidase - marine
gamma proteobacterium HTCC2080
Length = 824
Score = 35.1 bits (77), Expect = 1.2
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 85 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRK 264
V A G T RE++A G++ +FA T+ +A D R ++ ES + Q + Y ++ + +
Sbjct: 153 VAAISGATAREVKATGIDWIFAPTVAVAQD-YRWGRTYESYSSDPQVVSSYAGGMVEAMQ 211
Query: 265 AK 270
A+
Sbjct: 212 AE 213
>UniRef50_UPI0000EBCD3E Cluster: PREDICTED: similar to Chain A,
Structure Of Mammalian C3 With An Intact Thioester At 3a
Resolution; n=1; Bos taurus|Rep: PREDICTED: similar to
Chain A, Structure Of Mammalian C3 With An Intact
Thioester At 3a Resolution - Bos taurus
Length = 1612
Score = 34.3 bits (75), Expect = 2.1
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +3
Query: 249 HTFPKGKK--VLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPI-TEDEK-NF 401
HT P+G+ V+ EAN +E + + P+ P +Q + ARP T+DE NF
Sbjct: 353 HTTPRGEATLVINTEANLKELTIQVKTEAPIQPEEQASASMTARPYSTQDESGNF 407
>UniRef50_UPI0000F1D628 Cluster: PREDICTED: similar to mitotic
centromere-associated kinesin; n=2; Danio rerio|Rep:
PREDICTED: similar to mitotic centromere-associated
kinesin - Danio rerio
Length = 700
Score = 33.1 bits (72), Expect = 4.9
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 207 ANQCSKNKGIQSASHTFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITE 386
AN ++ A H KGK+V E N L L+ P ++PAP + P+T
Sbjct: 31 ANVSKSTVNVEWAEHGMTKGKEVDMNELNHLNSDLIQHLQ-PCHQ-EEPAPTPIPTPMTR 88
Query: 387 DEKNFKAYQY-LRGAR 431
K+ KA + LR +R
Sbjct: 89 MTKSVKASELPLRSSR 104
>UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n=1;
Streptomyces exfoliatus|Rep: Poly(3-hydroxybutyrate)
depolymerase - Streptomyces exfoliatus (Streptomyces
hydrogenans)
Length = 488
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 225 SLNIDLQ*FNRLVASTGIYSNSNRSGKYWVQSCGPNFTKSESS 97
++N DL + R + +Y NS+ SG WV GPN S +S
Sbjct: 143 AVNDDLATYYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTS 185
>UniRef50_Q1CZH8 Cluster: Amine oxidase, flavin-containing; n=1;
Myxococcus xanthus DK 1622|Rep: Amine oxidase,
flavin-containing - Myxococcus xanthus (strain DK 1622)
Length = 464
Score = 33.1 bits (72), Expect = 4.9
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 538 LFRLHFFSGWAFVTSSGFSAASFNLLARIPTSLAMERAPL 419
+FR+ F SG+A V SG A L AR+P+ L RAP+
Sbjct: 234 VFRM-FSSGYAAVPESGMGAIPAQLSARLPSGLLRMRAPV 272
>UniRef50_O45107 Cluster: Skp1 related (Ubiquitin ligase complex
component) protein 18, isoform a; n=2; Caenorhabditis
elegans|Rep: Skp1 related (Ubiquitin ligase complex
component) protein 18, isoform a - Caenorhabditis
elegans
Length = 660
Score = 32.7 bits (71), Expect = 6.5
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 222 KNKGIQSASHTFPKGKKVLKGEANEEERKLATQLRG-PLMPVQQPAPKSVARPITEDE 392
KN+G +++ T K KK+ K +A+ ++++ + +G P P Q P K V + E E
Sbjct: 201 KNRGNKASEETQKKPKKISKFKASRQQKEPENEQKGAPEPPAQAPPTKVVEEMMNELE 258
>UniRef50_Q49629 Cluster: Lepb1170_F1_46; n=1; Mycobacterium
leprae|Rep: Lepb1170_F1_46 - Mycobacterium leprae
Length = 132
Score = 32.3 bits (70), Expect = 8.6
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 231 GIQSASHTFPKGKKVLKGEANEEERKLATQLR 326
G + SHT+P KV+K AN+E R L T+L+
Sbjct: 42 GGRPLSHTYPALDKVIKEHANDEGRALPTRLK 73
>UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like;
n=10; Magnoliophyta|Rep: Protein serine/threonine
kinase-like - Arabidopsis thaliana (Mouse-ear cress)
Length = 410
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 261 KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQY 416
KGK++L+ A E + T P P+P+S+ TE E+N + + Y
Sbjct: 25 KGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTEREQNLRVFSY 76
>UniRef50_P55541 Cluster: Uncharacterized short-chain type
dehydrogenase/reductase y4lA; n=5; Rhizobiales|Rep:
Uncharacterized short-chain type dehydrogenase/reductase
y4lA - Rhizobium sp. (strain NGR234)
Length = 278
Score = 32.3 bits (70), Expect = 8.6
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 240 SASHTFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVAR 374
SA H P+ + +L + ++ +AT LRG L+ +Q P+ +AR
Sbjct: 92 SAMHLTPRDRAILDLDLAVWDQTMATNLRGTLLCCRQAIPRMIAR 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,741,622
Number of Sequences: 1657284
Number of extensions: 9846393
Number of successful extensions: 29389
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 28455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29382
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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