Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30633
         (336 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   4.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   4.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   6.0  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   8.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   8.0  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 107 GYPAAKLRSYHWSV 148
           G  A+KL S+HW +
Sbjct: 233 GMAASKLNSFHWHI 246


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 221  NGFKEGKPTPPRRL*LRHESICA 289
            NG   G P   RRL +R E++ A
Sbjct: 1448 NGTNAGTPVLSRRLTMRRETMKA 1470


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 221  NGFKEGKPTPPRRL*LRHESICA 289
            NG   G P   RRL +R E++ A
Sbjct: 1448 NGTNAGTPVLSRRLTMRRETMKA 1470


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 221  NGFKEGKPTPPRRL*LRHESICA 289
            NG   G P   RRL +R E++ A
Sbjct: 1448 NGTNAGTPVLSRRLTMRRETMKA 1470


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 221  NGFKEGKPTPPRRL*LRHESICA 289
            NG   G P   RRL +R E++ A
Sbjct: 1448 NGTNAGTPVLSRRLTMRRETMKA 1470


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 143 TSGRIVILLQDIHIGRILIFECDMTIYH 60
           TS   V+L+ D+H    +IF  DM   H
Sbjct: 162 TSMNFVLLIGDLHTSIYIIF-FDMFYQH 188


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 240 NQRRPEGCSFVMNQY 284
           N   P+ C F+ NQ+
Sbjct: 169 NSASPKACQFLYNQF 183


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 240 NQRRPEGCSFVMNQY 284
           N   P+ C F+ NQ+
Sbjct: 189 NSASPKACQFLYNQF 203


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 95  ILIFECDMTIYHIFCITY 42
           +L+F    T Y++ CI Y
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 48  YAEDVVDRHITFKNQNAPNVDILQQNYDPTTGQ*RLS 158
           YA   +D H      N    DI+Q  Y   TG  R++
Sbjct: 209 YAFATIDPHNFNMISNDDESDIIQGGYISVTGLKRVN 245


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 95  ILIFECDMTIYHIFCITY 42
           +L+F    T Y++ CI Y
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 209 RRFRNGFKEGKPT 247
           R+F   F+ GKP+
Sbjct: 113 RKFETSFESGKPS 125


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 63  VDRHITFKNQNAPN 104
           +DR++ F +QN  N
Sbjct: 796 IDRNVVFSSQNNTN 809


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 101 GRILIFECDMTIYHIFCI 48
           G I  F+CD+     FC+
Sbjct: 370 GFISDFDCDINSIQYFCL 387


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 105 VDILQQNYD 131
           +D+LQ+NYD
Sbjct: 1   MDVLQKNYD 9


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,481
Number of Sequences: 336
Number of extensions: 1300
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)