Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30631
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   6.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 121 RYDKLKRNWRKPRGIDNR 174
           +++ L  +W  PRG D+R
Sbjct: 631 QFNGLDVDWEYPRGADDR 648


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +2

Query: 152 NLEVLTTESAAIQGSILDAQHRL 220
           N E  TTESA I     DAQ RL
Sbjct: 318 NQEKTTTESAKISVIQDDAQMRL 340


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 186 IAADSVVNTSRFTPIPLKF 130
           +  D V + +  TP+PL+F
Sbjct: 454 VVKDFVFDPTERTPVPLRF 472


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,474
Number of Sequences: 336
Number of extensions: 2000
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)