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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30631
         (488 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841     99   9e-22
08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848...    99   9e-22
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245...    82   2e-16
09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078...    58   3e-09
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24...    30   0.87 
01_06_1680 - 39123536-39123628,39123726-39123821,39123941-391240...    29   2.6  
08_02_1238 + 25486263-25487574,25488210-25489117                       28   3.5  
03_02_0203 + 6370729-6370850,6371213-6371391,6371516-6371625,637...    27   6.1  
12_02_0542 - 20166044-20166111,20166399-20166526,20166613-201666...    27   8.1  
04_04_0687 - 27262742-27262784,27263429-27263584,27263698-272637...    27   8.1  
03_05_0796 + 27787401-27788831                                         27   8.1  
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922...    27   8.1  
02_05_0250 + 27153048-27154453,27154546-27154885                       27   8.1  

>09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841
          Length = 133

 Score =   99 bits (238), Expect = 9e-22
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +2

Query: 245 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 424
           Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VTN  AR
Sbjct: 67  YLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLAR 126

Query: 425 LRSQEND 445
           LRSQE++
Sbjct: 127 LRSQEDE 133



 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180
           MA+ P+    IVKKR K+F R  SDRY  LK +WR+P+GID+RVR
Sbjct: 1   MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 44



 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +3

Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
           ++FKG  LMPNIGYGS+KKTRH LP
Sbjct: 45  RKFKGCTLMPNIGYGSDKKTRHYLP 69


>08_02_1315 +
           26083856-26083945,26084093-26084226,26084753-26084819,
           26085011-26085192,26085315-26085444
          Length = 200

 Score =   99 bits (238), Expect = 9e-22
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +2

Query: 245 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 424
           Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VTN  AR
Sbjct: 134 YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLAR 193

Query: 425 LRSQEND 445
           LRSQE++
Sbjct: 194 LRSQEDE 200



 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +3

Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
           ++FKG  LMPNIGYGS+KKTRH LP
Sbjct: 112 RKFKGCTLMPNIGYGSDKKTRHYLP 136



 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 138
           MA+ P+    IVKKR K+F R  SDRY  LK
Sbjct: 1   MAV-PLLTKKIVKKRVKQFKRPHSDRYLCLK 30



 Score = 27.9 bits (59), Expect = 4.6
 Identities = 9/13 (69%), Positives = 13/13 (100%)
 Frame = +1

Query: 142 NWRKPRGIDNRVR 180
           +WR+P+GID+RVR
Sbjct: 99  SWRRPKGIDSRVR 111


>09_04_0633 -
           19123930-19124009,19124240-19124344,19124453-19124543,
           19124647-19124709,19126318-19126368,19126878-19126962,
           19127102-19127283,19128493-19128582
          Length = 248

 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = +2

Query: 245 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 409
           Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I ++
Sbjct: 67  YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVIS 121



 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180
           MA+ P+    IVKKR K+F R  SDRY  LK +WR+P+GID+RVR
Sbjct: 1   MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 44



 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +3

Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
           ++FKG  LMPNIGYGS+KKTRH LP
Sbjct: 45  RKFKGCTLMPNIGYGSDKKTRHYLP 69


>09_04_0630 +
           19104678-19105463,19106169-19106348,19107775-19107864,
           19108777-19108958,19109968-19109974,19111763-19111833,
           19112188-19112224,19112433-19112603
          Length = 507

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = +1

Query: 34  ETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180
           +TY+M + P+    IVKKR K+F R  SDRY  LK +WR+P+GID+RVR
Sbjct: 319 DTYEMVV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 366



 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +3

Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
           ++FKG  LMPNIGYGS+KKTRH LP
Sbjct: 367 RKFKGCTLMPNIGYGSDKKTRHYLP 391



 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 245 YAPNGFRKVLVHNVKELEILMMQNR 319
           Y PN F+K +VHNV ELE+LMM NR
Sbjct: 389 YLPNKFKKFVVHNVSELELLMMHNR 413


>08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796,
            246893-247240,247882-248721,248786-248832,249470-249596,
            249672-249836,249973-251370,251453-251713,251802-252161
          Length = 1539

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +2

Query: 77   SSKRGRRDLSGINRIAMTNLRGIGVNLEVLTTESAAIQGSILDAQHRLRFQQEDPSYAPN 256
            SS  GR D           +  +    EV + E + +QG  +   H +   QE PS APN
Sbjct: 997  SSTGGRNDEDSYTAPCQLEVDSMAQTKEVPSFEISEVQGDGI-VVHPISLDQE-PSNAPN 1054

Query: 257  GFRKV 271
             FRK+
Sbjct: 1055 HFRKI 1059


>01_06_1680 -
           39123536-39123628,39123726-39123821,39123941-39124093,
           39124273-39124382,39124601-39124757,39124867-39124877,
           39125138-39125228,39125401-39125496,39125605-39125724,
           39125914-39125978,39126066-39126168,39126406-39126631,
           39126714-39126790
          Length = 465

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +2

Query: 155 LEVLTTESAAIQGS--ILDAQHRLRFQQEDPSYAPNGFRKVLVHNVKELEILMMQNRKYC 328
           LE++T E  +I G   ++D Q    FQ  +P    N   ++ ++ +KE       N   C
Sbjct: 338 LEIMTVELFSIYGKQLMIDPQD---FQDAEPDILANSASEI-INRIKE-------NDDQC 386

Query: 329 AEIAHGVSSKKRKLIVERAQQLSI 400
           A     +  +K+ L VE A  +SI
Sbjct: 387 AMALRSLCHRKKGLTVEEASLISI 410


>08_02_1238 + 25486263-25487574,25488210-25489117
          Length = 739

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -2

Query: 385 GSFHDQLPLL----RRDTVSDLCAVLPVLHHQ 302
           G+ H+Q P L    RRD V+D+ A L  +HH+
Sbjct: 466 GAVHEQRPALSWESRRDIVADVAAGLHYVHHE 497


>03_02_0203 +
           6370729-6370850,6371213-6371391,6371516-6371625,
           6372721-6373575
          Length = 421

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 337 RSRCLFEEAEADRGKSPAAQHQSDECGRSPPVP 435
           RS      ++A+RG SPAA H  D    SP  P
Sbjct: 40  RSSTSRRHSDANRGNSPAAPHSLDIYISSPAAP 72


>12_02_0542 -
           20166044-20166111,20166399-20166526,20166613-20166686,
           20166934-20166995,20167903-20168098,20168106-20169086
          Length = 502

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +1

Query: 268 GPSSQC*RAGNLDDAKQEVLRRDRSRCLFEEAEAD-RGKSPAAQHQSDE 411
           GP S     G LD  K  V RRD +R L    +A    +  AA   SDE
Sbjct: 35  GPGSFADEHGELDQEKFAVSRRDAARRLIAAVDATLLARRAAAGEGSDE 83


>04_04_0687 -
           27262742-27262784,27263429-27263584,27263698-27263783,
           27263881-27264188,27265337-27265455,27265989-27266075,
           27266440-27266546
          Length = 301

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 436 LGPEASGRIRHSDAELLGSFHDQL 365
           L PE S R  +S A+LL  FH QL
Sbjct: 30  LNPETSARAANSFAKLLARFHVQL 53


>03_05_0796 + 27787401-27788831
          Length = 476

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 358 EAEADRGKSPAAQHQSDECGR 420
           + ++D GK    QH+ DECG+
Sbjct: 393 DGDSDVGKMKIVQHKCDECGK 413


>03_05_0398 +
           23790257-23790323,23791116-23791339,23792208-23792275,
           23794738-23794980,23795108-23795237,23797235-23797954
          Length = 483

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 281 CELGPYGIHWEHMTGLLVGTVT 216
           C LG +  HW+H T L+   +T
Sbjct: 79  CILGYFAFHWDHATALISQALT 100


>02_05_0250 + 27153048-27154453,27154546-27154885
          Length = 581

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 289 RAGNLDDAKQEVLRR-DRSRCLFEEAEADRGKSPAAQHQSDECGRSPPVPGERLN 450
           RAG + +A +   RR D +R     A  D+G S AAQ  S      PPV  +RLN
Sbjct: 84  RAGAVPEADRAAPRRYDWARA----ARTDKGVSAAAQVVSGRFYVDPPVFTDRLN 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,275,378
Number of Sequences: 37544
Number of extensions: 241363
Number of successful extensions: 844
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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