BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30631 (488 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841 99 9e-22 08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848... 99 9e-22 09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 82 2e-16 09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078... 58 3e-09 08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24... 30 0.87 01_06_1680 - 39123536-39123628,39123726-39123821,39123941-391240... 29 2.6 08_02_1238 + 25486263-25487574,25488210-25489117 28 3.5 03_02_0203 + 6370729-6370850,6371213-6371391,6371516-6371625,637... 27 6.1 12_02_0542 - 20166044-20166111,20166399-20166526,20166613-201666... 27 8.1 04_04_0687 - 27262742-27262784,27263429-27263584,27263698-272637... 27 8.1 03_05_0796 + 27787401-27788831 27 8.1 03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 27 8.1 02_05_0250 + 27153048-27154453,27154546-27154885 27 8.1 >09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841 Length = 133 Score = 99 bits (238), Expect = 9e-22 Identities = 48/67 (71%), Positives = 54/67 (80%) Frame = +2 Query: 245 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 424 Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VTN AR Sbjct: 67 YLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLAR 126 Query: 425 LRSQEND 445 LRSQE++ Sbjct: 127 LRSQEDE 133 Score = 54.0 bits (124), Expect = 6e-08 Identities = 26/45 (57%), Positives = 33/45 (73%) Frame = +1 Query: 46 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180 MA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVR Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 44 Score = 45.6 bits (103), Expect = 2e-05 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254 ++FKG LMPNIGYGS+KKTRH LP Sbjct: 45 RKFKGCTLMPNIGYGSDKKTRHYLP 69 >08_02_1315 + 26083856-26083945,26084093-26084226,26084753-26084819, 26085011-26085192,26085315-26085444 Length = 200 Score = 99 bits (238), Expect = 9e-22 Identities = 48/67 (71%), Positives = 54/67 (80%) Frame = +2 Query: 245 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 424 Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VTN AR Sbjct: 134 YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLAR 193 Query: 425 LRSQEND 445 LRSQE++ Sbjct: 194 LRSQEDE 200 Score = 45.6 bits (103), Expect = 2e-05 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254 ++FKG LMPNIGYGS+KKTRH LP Sbjct: 112 RKFKGCTLMPNIGYGSDKKTRHYLP 136 Score = 29.9 bits (64), Expect = 1.1 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +1 Query: 46 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 138 MA+ P+ IVKKR K+F R SDRY LK Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYLCLK 30 Score = 27.9 bits (59), Expect = 4.6 Identities = 9/13 (69%), Positives = 13/13 (100%) Frame = +1 Query: 142 NWRKPRGIDNRVR 180 +WR+P+GID+RVR Sbjct: 99 SWRRPKGIDSRVR 111 >09_04_0633 - 19123930-19124009,19124240-19124344,19124453-19124543, 19124647-19124709,19126318-19126368,19126878-19126962, 19127102-19127283,19128493-19128582 Length = 248 Score = 82.2 bits (194), Expect = 2e-16 Identities = 38/55 (69%), Positives = 44/55 (80%) Frame = +2 Query: 245 YAPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 409 Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I ++ Sbjct: 67 YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVIS 121 Score = 54.0 bits (124), Expect = 6e-08 Identities = 26/45 (57%), Positives = 33/45 (73%) Frame = +1 Query: 46 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180 MA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVR Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 44 Score = 45.6 bits (103), Expect = 2e-05 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254 ++FKG LMPNIGYGS+KKTRH LP Sbjct: 45 RKFKGCTLMPNIGYGSDKKTRHYLP 69 >09_04_0630 + 19104678-19105463,19106169-19106348,19107775-19107864, 19108777-19108958,19109968-19109974,19111763-19111833, 19112188-19112224,19112433-19112603 Length = 507 Score = 58.4 bits (135), Expect = 3e-09 Identities = 27/49 (55%), Positives = 36/49 (73%) Frame = +1 Query: 34 ETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180 +TY+M + P+ IVKKR K+F R SDRY LK +WR+P+GID+RVR Sbjct: 319 DTYEMVV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR 366 Score = 45.6 bits (103), Expect = 2e-05 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254 ++FKG LMPNIGYGS+KKTRH LP Sbjct: 367 RKFKGCTLMPNIGYGSDKKTRHYLP 391 Score = 41.5 bits (93), Expect = 4e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 245 YAPNGFRKVLVHNVKELEILMMQNR 319 Y PN F+K +VHNV ELE+LMM NR Sbjct: 389 YLPNKFKKFVVHNVSELELLMMHNR 413 >08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796, 246893-247240,247882-248721,248786-248832,249470-249596, 249672-249836,249973-251370,251453-251713,251802-252161 Length = 1539 Score = 30.3 bits (65), Expect = 0.87 Identities = 21/65 (32%), Positives = 29/65 (44%) Frame = +2 Query: 77 SSKRGRRDLSGINRIAMTNLRGIGVNLEVLTTESAAIQGSILDAQHRLRFQQEDPSYAPN 256 SS GR D + + EV + E + +QG + H + QE PS APN Sbjct: 997 SSTGGRNDEDSYTAPCQLEVDSMAQTKEVPSFEISEVQGDGI-VVHPISLDQE-PSNAPN 1054 Query: 257 GFRKV 271 FRK+ Sbjct: 1055 HFRKI 1059 >01_06_1680 - 39123536-39123628,39123726-39123821,39123941-39124093, 39124273-39124382,39124601-39124757,39124867-39124877, 39125138-39125228,39125401-39125496,39125605-39125724, 39125914-39125978,39126066-39126168,39126406-39126631, 39126714-39126790 Length = 465 Score = 28.7 bits (61), Expect = 2.6 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +2 Query: 155 LEVLTTESAAIQGS--ILDAQHRLRFQQEDPSYAPNGFRKVLVHNVKELEILMMQNRKYC 328 LE++T E +I G ++D Q FQ +P N ++ ++ +KE N C Sbjct: 338 LEIMTVELFSIYGKQLMIDPQD---FQDAEPDILANSASEI-INRIKE-------NDDQC 386 Query: 329 AEIAHGVSSKKRKLIVERAQQLSI 400 A + +K+ L VE A +SI Sbjct: 387 AMALRSLCHRKKGLTVEEASLISI 410 >08_02_1238 + 25486263-25487574,25488210-25489117 Length = 739 Score = 28.3 bits (60), Expect = 3.5 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = -2 Query: 385 GSFHDQLPLL----RRDTVSDLCAVLPVLHHQ 302 G+ H+Q P L RRD V+D+ A L +HH+ Sbjct: 466 GAVHEQRPALSWESRRDIVADVAAGLHYVHHE 497 >03_02_0203 + 6370729-6370850,6371213-6371391,6371516-6371625, 6372721-6373575 Length = 421 Score = 27.5 bits (58), Expect = 6.1 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +1 Query: 337 RSRCLFEEAEADRGKSPAAQHQSDECGRSPPVP 435 RS ++A+RG SPAA H D SP P Sbjct: 40 RSSTSRRHSDANRGNSPAAPHSLDIYISSPAAP 72 >12_02_0542 - 20166044-20166111,20166399-20166526,20166613-20166686, 20166934-20166995,20167903-20168098,20168106-20169086 Length = 502 Score = 27.1 bits (57), Expect = 8.1 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = +1 Query: 268 GPSSQC*RAGNLDDAKQEVLRRDRSRCLFEEAEAD-RGKSPAAQHQSDE 411 GP S G LD K V RRD +R L +A + AA SDE Sbjct: 35 GPGSFADEHGELDQEKFAVSRRDAARRLIAAVDATLLARRAAAGEGSDE 83 >04_04_0687 - 27262742-27262784,27263429-27263584,27263698-27263783, 27263881-27264188,27265337-27265455,27265989-27266075, 27266440-27266546 Length = 301 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 436 LGPEASGRIRHSDAELLGSFHDQL 365 L PE S R +S A+LL FH QL Sbjct: 30 LNPETSARAANSFAKLLARFHVQL 53 >03_05_0796 + 27787401-27788831 Length = 476 Score = 27.1 bits (57), Expect = 8.1 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +1 Query: 358 EAEADRGKSPAAQHQSDECGR 420 + ++D GK QH+ DECG+ Sbjct: 393 DGDSDVGKMKIVQHKCDECGK 413 >03_05_0398 + 23790257-23790323,23791116-23791339,23792208-23792275, 23794738-23794980,23795108-23795237,23797235-23797954 Length = 483 Score = 27.1 bits (57), Expect = 8.1 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -1 Query: 281 CELGPYGIHWEHMTGLLVGTVT 216 C LG + HW+H T L+ +T Sbjct: 79 CILGYFAFHWDHATALISQALT 100 >02_05_0250 + 27153048-27154453,27154546-27154885 Length = 581 Score = 27.1 bits (57), Expect = 8.1 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 289 RAGNLDDAKQEVLRR-DRSRCLFEEAEADRGKSPAAQHQSDECGRSPPVPGERLN 450 RAG + +A + RR D +R A D+G S AAQ S PPV +RLN Sbjct: 84 RAGAVPEADRAAPRRYDWARA----ARTDKGVSAAAQVVSGRFYVDPPVFTDRLN 134 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,275,378 Number of Sequences: 37544 Number of extensions: 241363 Number of successful extensions: 844 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 817 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 844 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1011709100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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