Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30631
(488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 104 2e-22
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 104 2e-22
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 104 2e-22
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 104 2e-22
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 91 1e-18
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 2e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 8e-06
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 104 bits (249), Expect = 2e-22
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = +2
Query: 251 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 430
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 431 SQEND 445
S+EN+
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 49 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 53.6 bits (123), Expect = 4e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +3
Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
+RFKGQ LMPNIGYGSNKKT+HMLP
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLP 71
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 104 bits (249), Expect = 2e-22
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = +2
Query: 251 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 430
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 431 SQEND 445
S+EN+
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 49 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 53.6 bits (123), Expect = 4e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +3
Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
+RFKGQ LMPNIGYGSNKKT+HMLP
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLP 71
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 104 bits (249), Expect = 2e-22
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = +2
Query: 251 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 430
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 431 SQEND 445
S+EN+
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 49 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 53.6 bits (123), Expect = 4e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +3
Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
+RFKGQ LMPNIGYGSNKKT+HMLP
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLP 71
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 104 bits (249), Expect = 2e-22
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = +2
Query: 251 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 430
P+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN ARLR
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLR 130
Query: 431 SQEND 445
S+EN+
Sbjct: 131 SEENE 135
Score = 84.6 bits (200), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 49 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 180
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 53.6 bits (123), Expect = 4e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +3
Query: 180 QRFKGQYLMPNIGYGSNKKTRHMLP 254
+RFKGQ LMPNIGYGSNKKT+HMLP
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHMLP 71
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 91.5 bits (217), Expect = 1e-18
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = +2
Query: 125 MTNLRGIGVNLEVLTTESAAIQGSILDAQHRLRF--QQEDPSYAPNGFRKVLVHNVKELE 298
M+ LR G N EVLTT I+G + + + ++ P+GF K LVHNVKELE
Sbjct: 1 MSKLRVTGGNTEVLTT--GFIEGLRARSMPNIGYGRNKKTKHILPSGFWKFLVHNVKELE 58
Query: 299 ILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQEND 445
+L++ N+ YC EI H VSSK K I+ERA Q+ IRVTNA A L S E++
Sbjct: 59 VLLVSNKSYCVEITHDVSSKNCKAILERAAQVVIRVTNANASLHSAESE 107
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 2e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 49 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 141
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 8e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 49 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 138
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,878,140
Number of Sequences: 237096
Number of extensions: 1313646
Number of successful extensions: 3594
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3593
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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