Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30630
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         25   0.36 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.3  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 515 RLVSPLAPTLQINYVSLNTPVLAVSLNTATFKLPKPYTQQRGR 387
           R +   +  L+I    +NT     +LN+ +  LP+ Y+Q RGR
Sbjct: 169 RALEKTSEELKIPKAKINTGKTQYNLNSKS--LPRQYSQSRGR 209


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 48  NTSPPHFADAFRSLAPSSVILTEFKGHLRFLL 143
           N S  H  +  R   P    +TE+K HL + L
Sbjct: 219 NHSKVHIREDKRLTCPKCPFITEYKHHLEYHL 250


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 427 LLNCQNHIPNNVEEESE 377
           LL C N I NN++ E+E
Sbjct: 254 LLTCLNFITNNLKSENE 270


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 427 LLNCQNHIPNNVEEESE 377
           LL C N I NN++ E+E
Sbjct: 254 LLTCLNFITNNLKSENE 270


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 46  AIPHPLTSPTRSVVSPPAP*YLP 114
           A P+P+  P  + +SPP   Y P
Sbjct: 265 ASPYPMQRPKSASLSPPPHVYNP 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,712
Number of Sequences: 336
Number of extensions: 1806
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)