Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30630
         (584 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AC025716-19|AAK39602.2|  549|Caenorhabditis elegans Hypothetical...    29   1.8  
Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical p...    27   7.4  
U28942-1|AAA68355.2|  441|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 27  PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 155
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 664 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 706


>Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 27  PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 155
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 741 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 783


>Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 27  PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 155
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 664 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 706


>Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 27  PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 155
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 741 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 783


>AC025716-19|AAK39602.2|  549|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.17 protein.
          Length = 549

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 19  EPSPSLT-SLAIPHPLTSPTRSVVSPPAP*YLPNL 120
           EPSPS   S+    P  SPT+ V+ PP P  L N+
Sbjct: 3   EPSPSRRRSITSGIPCPSPTKQVLPPPPPEELHNI 37


>Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical
           protein R09E10.9 protein.
          Length = 443

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 13  TAEPSPSLTSLAIPHPLTSPTRS-VVSPPAP*YLPNL 120
           +A PSPS++   +P    +P +  VV PP P + PNL
Sbjct: 386 SALPSPSVSPAPVPTTSCAPQKPLVVQPPVP-FAPNL 421


>Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical
           protein T06E4.12 protein.
          Length = 228

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 37  TSLAIPHPLTSPTRSVVSPPAP 102
           T LA P PL +P   +++PPAP
Sbjct: 61  TVLAAPAPLLAPPAPLLAPPAP 82


>U28942-1|AAA68355.2|  441|Caenorhabditis elegans Hypothetical
           protein F56D3.1 protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 13  TAEPSPSLTSLAIPHPLTSPTRSVVSPPAP 102
           T  P P+ T   IP   T+P      PPAP
Sbjct: 119 TTRPPPATTIRTIPFVQTTPATFATLPPAP 148


>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 22  PSPSLTSLAIPHPLTSPTRSVVS 90
           PSPS+    +P P+  P  SVVS
Sbjct: 279 PSPSVLPSPVPAPMAKPRESVVS 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,365,986
Number of Sequences: 27780
Number of extensions: 169135
Number of successful extensions: 641
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)