BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30629X (417 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151 48 3e-06 07_01_1160 - 10986404-10986760,10986853-10986987,10987074-10987997 29 1.1 06_03_1489 + 30492702-30493760 28 2.6 04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 28 3.5 08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 27 4.6 04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 27 4.6 02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 27 4.6 02_05_0202 + 26708049-26709074 27 4.6 11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 27 6.0 05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694... 27 8.0 03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 27 8.0 >08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151 Length = 124 Score = 48.0 bits (109), Expect = 3e-06 Identities = 18/33 (54%), Positives = 22/33 (66%) Frame = +1 Query: 154 VDLDLPGAAQHYCLHCARYFIDEQALNDHFKTK 252 VD DLPG Q YCLHC RYF E +H+++K Sbjct: 54 VDEDLPGMGQFYCLHCDRYFASESVKEEHYRSK 86 >07_01_1160 - 10986404-10986760,10986853-10986987,10987074-10987997 Length = 471 Score = 29.5 bits (63), Expect = 1.1 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 55 LKKRWRVRNRKKDLDEIDQDLKEENAEKL-LNQKVDLDLPGAAQHYCLHCAR 207 + +RWR R L+ DL + +++ L K+ + PG A+ + LHC R Sbjct: 57 VSRRWRPLWRSAPLNLDVYDLSGQERKRVALASKILAEHPGPARRFSLHCFR 108 >06_03_1489 + 30492702-30493760 Length = 352 Score = 28.3 bits (60), Expect = 2.6 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +1 Query: 22 KRKIYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEEN-AEKLLNQKVDLDLPG 174 KRK + K + K +D I D ++N AEK LNQ VD PG Sbjct: 253 KRKELLLNQHNSKDTQEAKEIKPSIDSIRYDESKQNGAEKRLNQLVDAKDPG 304 >04_04_0397 - 24921892-24922947,24923486-24923734,24923807-24924157, 24924244-24924331,24924466-24924563,24925141-24925362, 24925490-24925585,24926410-24926481,24927156-24927305 Length = 793 Score = 27.9 bits (59), Expect = 3.5 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +1 Query: 43 GDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQ 183 GD + + R RVR + L E+ + + A +NQ++D++L G Q Sbjct: 52 GDPNFEVRERVRYTRDQLLELREIVDIPEAILRINQEIDIELHGEDQ 98 >08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831, 901912-902016,902245-902391,903273-903354,903445-903786, 903873-904177,904259-904435,904799-904852,905171-905254, 905855-905968,906048-906321,907552-907926,908003-908267, 908352-908538,908615-909052,909895-909966,910037-910630, 911471-911623,911700-911828,912326-912657,912705-912840, 913046-913491,913580-915087,915169-915431,915622-915738, 915844-916014,916743-916845,916930-916988,918360-918461, 918560-918649,918727-918877,919745-919830,919926-920102, 920915-920978,921859-922008,923132-923211,923311-923376, 924540-924747,925502-925575,925761-925848,926140-926312, 926541-926609,926698-926741,927074-927167,927290-927366, 927475-927552,927992-928085 Length = 3314 Score = 27.5 bits (58), Expect = 4.6 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -2 Query: 356 FSXCCSFET--PVASSSL*LFYSIRFKL 279 FS C S E PV+SSS FYS+ FK+ Sbjct: 1660 FSFCRSMELKFPVSSSSASSFYSVTFKV 1687 Score = 27.1 bits (57), Expect = 6.0 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = -3 Query: 202 HNVDSNVVLLLADLNQLFGSVIFQH---FLPLNLGLFHP--NLSFCYALSTAFLNVC 47 H++ S V L D + +FG IF L + P N+ FC L +AF+N+C Sbjct: 775 HDISSTFVKL--DASIVFGLCIFLDEPVLKQLEVSFIVPFANMYFCQTLYSAFINLC 829 >04_04_0198 + 23502657-23502900,23505228-23505298,23505690-23505727, 23505905-23507693 Length = 713 Score = 27.5 bits (58), Expect = 4.6 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +1 Query: 169 PGAAQHYCLHCARYFIDEQALNDHFK 246 P QH CL C F QAL H + Sbjct: 568 PAPQQHQCLRCPMVFPTGQALGGHMR 593 >02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219, 27043601-27043705,27043828-27044257,27044356-27044517, 27044565-27045260,27045349-27046128,27046441-27046654, 27047621-27047981,27047993-27048140,27048276-27048419, 27048784-27048888,27049749-27049794,27050089-27050255, 27050338-27050490,27050654-27050950,27051053-27051220, 27051298-27051363,27051451-27051927,27052031-27052768, 27052935-27053120 Length = 1993 Score = 27.5 bits (58), Expect = 4.6 Identities = 14/58 (24%), Positives = 29/58 (50%) Frame = +1 Query: 49 THLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDE 222 T ++R + K+ + + +L++ +KLL ++ ++ AA+ Y YFI E Sbjct: 1371 TLARQRLEIDEMKRRHNTLYDELQDTKKQKLLLEQHISEIKSAAKDYVQEITEYFIQE 1428 >02_05_0202 + 26708049-26709074 Length = 341 Score = 27.5 bits (58), Expect = 4.6 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = +1 Query: 163 DLPGAAQ-HYCLHCARYFIDEQALNDHFKTKV 255 D+ G A H C +C R F QAL H K+ V Sbjct: 254 DMDGKAPPHECPYCYRVFASGQALGGHKKSHV 285 >11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513, 295071-295646,295828-296260,296470-297338,297433-298227, 298709-298753,299135-299352,300055-300364,302715-302984 Length = 1331 Score = 27.1 bits (57), Expect = 6.0 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = -3 Query: 205 LHNVDSNVVLLLADLNQLFGSVIFQHFLPLNLGLFHPNLSFCYALSTAFLNV 50 LH+ S +L + +FG ++ Q + G FHP F Y S L V Sbjct: 507 LHHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPV 558 >05_03_0610 - 16167557-16167679,16168236-16168418,16169291-16169414, 16169514-16169626,16169668-16169742 Length = 205 Score = 26.6 bits (56), Expect = 8.0 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 91 DLDEIDQDLKEENAEKLLNQKVDLDLPG 174 DL+ +Q+LK + + +N V +DLPG Sbjct: 42 DLENGNQELKSDLKDLYINGAVQMDLPG 69 >03_02_0665 - 10268959-10269148,10269344-10269936,10270572-10271004, 10271172-10272040,10272121-10272915,10273612-10273829, 10274931-10275230,10276834-10277161 Length = 1241 Score = 26.6 bits (56), Expect = 8.0 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = -3 Query: 205 LHNVDSNVVLLLADLNQLFGSVIFQHFLPLNLGLFHPNLSFCY 77 L N S +L + +FG ++ Q + G FHP F Y Sbjct: 508 LRNFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPQYQFFY 550 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,134,051 Number of Sequences: 37544 Number of extensions: 145684 Number of successful extensions: 520 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 510 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 520 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 754585524 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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