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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30629X
         (417 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151     48   3e-06
07_01_1160 - 10986404-10986760,10986853-10986987,10987074-10987997     29   1.1  
06_03_1489 + 30492702-30493760                                         28   2.6  
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241...    28   3.5  
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90...    27   4.6  
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057...    27   4.6  
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432...    27   4.6  
02_05_0202 + 26708049-26709074                                         27   4.6  
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29...    27   6.0  
05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694...    27   8.0  
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710...    27   8.0  

>08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151
          Length = 124

 Score = 48.0 bits (109), Expect = 3e-06
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +1

Query: 154 VDLDLPGAAQHYCLHCARYFIDEQALNDHFKTK 252
           VD DLPG  Q YCLHC RYF  E    +H+++K
Sbjct: 54  VDEDLPGMGQFYCLHCDRYFASESVKEEHYRSK 86


>07_01_1160 - 10986404-10986760,10986853-10986987,10987074-10987997
          Length = 471

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 55  LKKRWRVRNRKKDLDEIDQDLKEENAEKL-LNQKVDLDLPGAAQHYCLHCAR 207
           + +RWR   R   L+    DL  +  +++ L  K+  + PG A+ + LHC R
Sbjct: 57  VSRRWRPLWRSAPLNLDVYDLSGQERKRVALASKILAEHPGPARRFSLHCFR 108


>06_03_1489 + 30492702-30493760
          Length = 352

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 22  KRKIYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEEN-AEKLLNQKVDLDLPG 174
           KRK       + K     +  K  +D I  D  ++N AEK LNQ VD   PG
Sbjct: 253 KRKELLLNQHNSKDTQEAKEIKPSIDSIRYDESKQNGAEKRLNQLVDAKDPG 304


>04_04_0397 -
           24921892-24922947,24923486-24923734,24923807-24924157,
           24924244-24924331,24924466-24924563,24925141-24925362,
           24925490-24925585,24926410-24926481,24927156-24927305
          Length = 793

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 43  GDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQ 183
           GD + + R RVR  +  L E+ + +    A   +NQ++D++L G  Q
Sbjct: 52  GDPNFEVRERVRYTRDQLLELREIVDIPEAILRINQEIDIELHGEDQ 98


>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
            901912-902016,902245-902391,903273-903354,903445-903786,
            903873-904177,904259-904435,904799-904852,905171-905254,
            905855-905968,906048-906321,907552-907926,908003-908267,
            908352-908538,908615-909052,909895-909966,910037-910630,
            911471-911623,911700-911828,912326-912657,912705-912840,
            913046-913491,913580-915087,915169-915431,915622-915738,
            915844-916014,916743-916845,916930-916988,918360-918461,
            918560-918649,918727-918877,919745-919830,919926-920102,
            920915-920978,921859-922008,923132-923211,923311-923376,
            924540-924747,925502-925575,925761-925848,926140-926312,
            926541-926609,926698-926741,927074-927167,927290-927366,
            927475-927552,927992-928085
          Length = 3314

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -2

Query: 356  FSXCCSFET--PVASSSL*LFYSIRFKL 279
            FS C S E   PV+SSS   FYS+ FK+
Sbjct: 1660 FSFCRSMELKFPVSSSSASSFYSVTFKV 1687



 Score = 27.1 bits (57), Expect = 6.0
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = -3

Query: 202 HNVDSNVVLLLADLNQLFGSVIFQH---FLPLNLGLFHP--NLSFCYALSTAFLNVC 47
           H++ S  V L  D + +FG  IF        L +    P  N+ FC  L +AF+N+C
Sbjct: 775 HDISSTFVKL--DASIVFGLCIFLDEPVLKQLEVSFIVPFANMYFCQTLYSAFINLC 829


>04_04_0198 +
           23502657-23502900,23505228-23505298,23505690-23505727,
           23505905-23507693
          Length = 713

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 169 PGAAQHYCLHCARYFIDEQALNDHFK 246
           P   QH CL C   F   QAL  H +
Sbjct: 568 PAPQQHQCLRCPMVFPTGQALGGHMR 593


>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
            27043601-27043705,27043828-27044257,27044356-27044517,
            27044565-27045260,27045349-27046128,27046441-27046654,
            27047621-27047981,27047993-27048140,27048276-27048419,
            27048784-27048888,27049749-27049794,27050089-27050255,
            27050338-27050490,27050654-27050950,27051053-27051220,
            27051298-27051363,27051451-27051927,27052031-27052768,
            27052935-27053120
          Length = 1993

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +1

Query: 49   THLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDE 222
            T  ++R  +   K+  + +  +L++   +KLL ++   ++  AA+ Y      YFI E
Sbjct: 1371 TLARQRLEIDEMKRRHNTLYDELQDTKKQKLLLEQHISEIKSAAKDYVQEITEYFIQE 1428


>02_05_0202 + 26708049-26709074
          Length = 341

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 163 DLPGAAQ-HYCLHCARYFIDEQALNDHFKTKV 255
           D+ G A  H C +C R F   QAL  H K+ V
Sbjct: 254 DMDGKAPPHECPYCYRVFASGQALGGHKKSHV 285


>11_01_0039 -
           290960-291086,291615-291714,291809-292013,292466-292513,
           295071-295646,295828-296260,296470-297338,297433-298227,
           298709-298753,299135-299352,300055-300364,302715-302984
          Length = 1331

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -3

Query: 205 LHNVDSNVVLLLADLNQLFGSVIFQHFLPLNLGLFHPNLSFCYALSTAFLNV 50
           LH+  S    +L  +  +FG ++ Q  +    G FHP   F Y  S   L V
Sbjct: 507 LHHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPV 558


>05_03_0610 -
           16167557-16167679,16168236-16168418,16169291-16169414,
           16169514-16169626,16169668-16169742
          Length = 205

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 91  DLDEIDQDLKEENAEKLLNQKVDLDLPG 174
           DL+  +Q+LK +  +  +N  V +DLPG
Sbjct: 42  DLENGNQELKSDLKDLYINGAVQMDLPG 69


>03_02_0665 -
           10268959-10269148,10269344-10269936,10270572-10271004,
           10271172-10272040,10272121-10272915,10273612-10273829,
           10274931-10275230,10276834-10277161
          Length = 1241

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 205 LHNVDSNVVLLLADLNQLFGSVIFQHFLPLNLGLFHPNLSFCY 77
           L N  S    +L  +  +FG ++ Q  +    G FHP   F Y
Sbjct: 508 LRNFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPQYQFFY 550


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,134,051
Number of Sequences: 37544
Number of extensions: 145684
Number of successful extensions: 520
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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