Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30629X
(417 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL391650-8|CAI17137.1| 134|Homo sapiens zinc finger protein 593... 60 2e-09
D45213-1|BAA20369.1| 116|Homo sapiens zinc finger protein protein. 58 9e-09
BC019267-1|AAH19267.1| 116|Homo sapiens zinc finger protein 593... 58 9e-09
BC002580-1|AAH02580.1| 116|Homo sapiens zinc finger protein 593... 58 9e-09
BC017234-1|AAH17234.1| 517|Homo sapiens MBD2-interacting zinc f... 29 6.2
BC012856-1|AAH12856.1| 517|Homo sapiens MBD2-interacting zinc f... 29 6.2
BC001945-1|AAH01945.1| 517|Homo sapiens MBD2-interacting zinc f... 29 6.2
BC001073-1|AAH01073.1| 517|Homo sapiens MBD2-interacting zinc f... 29 6.2
BC133026-1|AAI33027.1| 364|Homo sapiens zinc finger protein 474... 29 8.2
BC133022-1|AAI33023.1| 364|Homo sapiens zinc finger protein 474... 29 8.2
AY461732-1|AAS21253.1| 364|Homo sapiens testis-specific zinc fi... 29 8.2
AB021644-1|BAA86990.1| 642|Homo sapiens gonadotropin inducible ... 29 8.2
>AL391650-8|CAI17137.1| 134|Homo sapiens zinc finger protein 593
protein.
Length = 134
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = +1
Query: 55 LKKRWRVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQ 225
L ++ + + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID
Sbjct: 15 LARQMKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDST 74
Query: 226 ALNDHFKTK 252
L HF++K
Sbjct: 75 NLKTHFRSK 83
Score = 48.4 bits (110), Expect = 1e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +3
Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
T+ + F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 74 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 111
>D45213-1|BAA20369.1| 116|Homo sapiens zinc finger protein protein.
Length = 116
Score = 58.4 bits (135), Expect = 9e-09
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +1
Query: 70 RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 240
+ + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID L H
Sbjct: 2 KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61
Query: 241 FKTK 252
F++K
Sbjct: 62 FRSK 65
Score = 48.4 bits (110), Expect = 1e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +3
Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
T+ + F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93
>BC019267-1|AAH19267.1| 116|Homo sapiens zinc finger protein 593
protein.
Length = 116
Score = 58.4 bits (135), Expect = 9e-09
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +1
Query: 70 RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 240
+ + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID L H
Sbjct: 2 KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61
Query: 241 FKTK 252
F++K
Sbjct: 62 FRSK 65
Score = 48.4 bits (110), Expect = 1e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +3
Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
T+ + F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93
>BC002580-1|AAH02580.1| 116|Homo sapiens zinc finger protein 593
protein.
Length = 116
Score = 58.4 bits (135), Expect = 9e-09
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +1
Query: 70 RVRNRKKDLDEIDQDLKEENAEKLL---NQKVDLDLPGAAQHYCLHCARYFIDEQALNDH 240
+ + R+ DLDEI ++L+ + + + N + D DLPG H CL CARYFID L H
Sbjct: 2 KAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTH 61
Query: 241 FKTK 252
F++K
Sbjct: 62 FRSK 65
Score = 48.4 bits (110), Expect = 1e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +3
Query: 222 TSFE*SFQDKSHKRRLKALELEPYTIEESERAAGHGSF 335
T+ + F+ K HK+RLK L +EPY+ EE+ERAAG GS+
Sbjct: 56 TNLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSY 93
>BC017234-1|AAH17234.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 181 QHY-CLHCARYFIDEQALNDHFKTKV 255
QH+ C HC++ F E+ L DH + V
Sbjct: 227 QHFQCSHCSKRFATERLLRDHMRNHV 252
>BC012856-1|AAH12856.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 181 QHY-CLHCARYFIDEQALNDHFKTKV 255
QH+ C HC++ F E+ L DH + V
Sbjct: 227 QHFQCSHCSKRFATERLLRDHMRNHV 252
>BC001945-1|AAH01945.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 181 QHY-CLHCARYFIDEQALNDHFKTKV 255
QH+ C HC++ F E+ L DH + V
Sbjct: 227 QHFQCSHCSKRFATERLLRDHMRNHV 252
>BC001073-1|AAH01073.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 181 QHY-CLHCARYFIDEQALNDHFKTKV 255
QH+ C HC++ F E+ L DH + V
Sbjct: 227 QHFQCSHCSKRFATERLLRDHMRNHV 252
>BC133026-1|AAI33027.1| 364|Homo sapiens zinc finger protein 474
protein.
Length = 364
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 61 KRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQH-YCLHCARYFIDEQALND 237
++W++ N + + E+ Q L ++ + L N + P AQ +C HC+R F ++ L
Sbjct: 245 EKWKMENDRLPV-ELHQPLPQK-PQPLPNAQSSQAGPNQAQLVFCPHCSRIFTSDRLLVH 302
Query: 238 HFKTKVINGD*KHSSLNL 291
K K+ +LNL
Sbjct: 303 QRSCKTHPYGPKYQNLNL 320
>BC133022-1|AAI33023.1| 364|Homo sapiens zinc finger protein 474
protein.
Length = 364
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 61 KRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQH-YCLHCARYFIDEQALND 237
++W++ N + + E+ Q L ++ + L N + P AQ +C HC+R F ++ L
Sbjct: 245 EKWKMENDRLPV-ELHQPLPQK-PQPLPNAQSSQAGPNQAQLVFCPHCSRIFTSDRLLVH 302
Query: 238 HFKTKVINGD*KHSSLNL 291
K K+ +LNL
Sbjct: 303 QRSCKTHPYGPKYQNLNL 320
>AY461732-1|AAS21253.1| 364|Homo sapiens testis-specific zinc
finger protein protein.
Length = 364
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 61 KRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQH-YCLHCARYFIDEQALND 237
++W++ N + + E+ Q L ++ + L N + P AQ +C HC+R F ++ L
Sbjct: 245 EKWKMENDRLPV-ELHQPLPQK-PQPLPNAQSSQAGPNQAQLVFCPHCSRIFTSDRLLVH 302
Query: 238 HFKTKVINGD*KHSSLNL 291
K K+ +LNL
Sbjct: 303 QRSCKTHPYGPKYQNLNL 320
>AB021644-1|BAA86990.1| 642|Homo sapiens gonadotropin inducible
transcription repressor-4 protein.
Length = 642
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 124 ENAEKLLNQKVDLD-LPGAAQHYCLHCARYFIDEQALNDHFKT 249
E ++ N ++ + GA H C C R FI +LN H ++
Sbjct: 82 ETTSQMPNVNINKETFTGAKPHECSFCGRDFIHHSSLNRHMRS 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,711,567
Number of Sequences: 237096
Number of extensions: 779196
Number of successful extensions: 2669
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2669
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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