Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30629X
         (417 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-17|CAB60500.1|  128|Caenorhabditis elegans Hypothetical...    73   8e-14
AF039048-3|AAK68334.1|  246|Caenorhabditis elegans Hypothetical ...    30   0.78 
AC006662-5|AAF39894.1|  501|Caenorhabditis elegans Hypothetical ...    29   1.4  
AF000195-3|AAC24268.1|  689|Caenorhabditis elegans Hmg protein 3...    29   1.8  
Z81519-5|CAI46603.1|  590|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z81519-4|CAB04218.1|  592|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AL032663-2|CAA21759.1|   94|Caenorhabditis elegans Hypothetical ...    27   4.1  
Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U40946-3|AAO91681.1|  851|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z73906-4|CAA98117.1|  508|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical pr...    26   9.5  
U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical ...    26   9.5  
AF067607-1|AAY86220.1|  342|Caenorhabditis elegans Hypothetical ...    26   9.5  

>AL132860-17|CAB60500.1|  128|Caenorhabditis elegans Hypothetical
           protein Y56A3A.18 protein.
          Length = 128

 Score = 72.9 bits (171), Expect = 8e-14
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +1

Query: 88  KDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKV 255
           KDLD+I +DLK E A KLL Q++D DLPG  Q YC+ C R+F+DE+    H KTK+
Sbjct: 21  KDLDQIHEDLKPEKAAKLLQQEIDYDLPGNGQFYCIECERHFVDEKTRQLHRKTKL 76



 Score = 31.9 bits (69), Expect = 0.19
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 249 KSHKRRLKALELEPYTIEESERAAGHGSFKRATXR 353
           K HK R+K L+  PYT  E+  A G G F   T +
Sbjct: 75  KLHKNRVKTLKEVPYTQAEANAAGGSGFFPAITLK 109


>AF039048-3|AAK68334.1|  246|Caenorhabditis elegans Hypothetical
           protein F16B4.6 protein.
          Length = 246

 Score = 29.9 bits (64), Expect = 0.78
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 91  DLDEIDQDLKEENAEKLLNQKV 156
           DLD+I +DLK E A KLL ++V
Sbjct: 151 DLDQIHEDLKPEKAAKLLQKEV 172


>AC006662-5|AAF39894.1|  501|Caenorhabditis elegans Hypothetical
           protein H23L24.2 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 124 ENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKV 255
           EN E+  NQKV L L G      L CA     E+ L +  + ++
Sbjct: 134 ENEEQNQNQKVILSLDGGGLRVVLQCAILLAVERELGEPLRNRI 177


>AF000195-3|AAC24268.1|  689|Caenorhabditis elegans Hmg protein 3
           protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +3

Query: 243 QDKSHKRRLKALELEPYTIEESERAAGHGSFKRATXRKIVSQNIETSQADEDGDAI 410
           ++K +KR  K   ++   +++ ++       KRAT   I+  N   +   EDGD +
Sbjct: 531 KEKKNKREKKEKPVKEKAVKKGKKTKDPNEPKRATTAYIIWFNANRNSMKEDGDTL 586


>Z81519-5|CAI46603.1|  590|Caenorhabditis elegans Hypothetical
           protein F29C12.1b protein.
          Length = 590

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 139 LLNQKVDLDLPGAAQHYCLHCARYFID 219
           LL+     DLP  A+  C+HCA  FID
Sbjct: 16  LLSTYTLADLPSCARAKCVHCAVDFID 42


>Z81519-4|CAB04218.1|  592|Caenorhabditis elegans Hypothetical
           protein F29C12.1a protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 139 LLNQKVDLDLPGAAQHYCLHCARYFID 219
           LL+     DLP  A+  C+HCA  FID
Sbjct: 16  LLSTYTLADLPSCARAKCVHCAVDFID 42


>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
            T20G5.1 protein.
          Length = 1681

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +1

Query: 40   CGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLH--CARYF 213
            C +  +K+       K D+DE+ +++++ N  KLLN  ++  +   A     H   A+ +
Sbjct: 826  CSEDAIKQLIINTRGKFDIDELVEEVEKRNRLKLLNHWLESKIQEGATDAATHNAMAKIY 885

Query: 214  IDEQALNDHF 243
            ID     + F
Sbjct: 886  IDSNNNPERF 895


>AL032663-2|CAA21759.1|   94|Caenorhabditis elegans Hypothetical
           protein Y75B12B.3 protein.
          Length = 94

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 25  RKIYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLD 165
           +KIY    +  +   ++  ++ +  E+  + K EN EKL   + DLD
Sbjct: 17  KKIYESSKSGYESAKQLYEQQVNNPEVSDEQKSENLEKLKESRGDLD 63


>Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical
           protein R07E5.1 protein.
          Length = 812

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 85  KKDLDEIDQDLKEENAEKLLNQKVD 159
           +K+ D+ D D +EEN  +  NQKVD
Sbjct: 614 EKEYDDKDSDEEEENEAEPNNQKVD 638


>U40946-3|AAO91681.1|  851|Caenorhabditis elegans Hypothetical
           protein W05H9.2 protein.
          Length = 851

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 67  WRVRNRKKDLDEIDQDLKEENAEKLLNQKVD 159
           W +R +KK+L  +++++    A +LL  K+D
Sbjct: 521 WHLRQQKKELKRLNKEIHFAKAAELLWPKID 551


>Z73906-4|CAA98117.1|  508|Caenorhabditis elegans Hypothetical
           protein D2030.3 protein.
          Length = 508

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 205 LHNVDSNVVLLLADLNQLFG---SVIFQHFLPLNLGLFHPNLSFCY 77
           L + D +++  LA +++ FG   S +++HF  +   L HP    CY
Sbjct: 250 LESPDVDLIKTLAFISKTFGPVTSTLYKHFYVIFTALKHPIHEQCY 295


>Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical
           protein F23B12.7 protein.
          Length = 953

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = +1

Query: 76  RNRKKDLDEIDQDLKEENAEKL--LNQKVD 159
           RN+KKD++E D D+ E++   L  LN++ D
Sbjct: 810 RNKKKDVEEDDVDMDEDDDIDLNDLNEEED 839


>U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical
           protein C16A3.4 protein.
          Length = 375

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
 Frame = +1

Query: 52  HLKKRWRVRNRKK---DLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDE 222
           H K  W   N K+   +L  I  +L  E A    N    +        YC  C +    E
Sbjct: 25  HYKTEWHRYNLKRQAAELPAIGIELFNEKAASF-NPTKPVVAASVEPLYCKACRKSIKSE 83

Query: 223 QALNDHFKTK 252
            A+ DH  +K
Sbjct: 84  NAMTDHVASK 93


>AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical
           protein Y52B11A.1 protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 100 EIDQDLKEENAEKLLNQKVDLD 165
           ++D DLK+E  +K L  + DLD
Sbjct: 151 DVDDDLKDEIRKKFLEYEADLD 172


>AF067607-1|AAY86220.1|  342|Caenorhabditis elegans Hypothetical
           protein C18H7.10 protein.
          Length = 342

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 79  NRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQ 183
           N +KD DE ++D  ++  E L   K+D+  P   +
Sbjct: 242 NTQKDADEEEEDNSDDEPETLDANKIDIMSPSQTE 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,134,013
Number of Sequences: 27780
Number of extensions: 140244
Number of successful extensions: 604
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)