Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30628
(418 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 65 3e-13
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 25 0.22
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 23 0.90
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 23 0.90
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 23 0.90
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 22 2.8
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 3.6
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 21 3.6
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 21 4.8
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 4.8
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 64.9 bits (151), Expect = 3e-13
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DIRILRDIEQYY 177
ARG+D++ V VINYDLP + + Y+HRIGR+GR G KG A +F D D + D+ +
Sbjct: 470 ARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKIL 529
Query: 178 STQIDEMP 201
S E+P
Sbjct: 530 SQAKQEIP 537
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 25.4 bits (53), Expect = 0.22
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 132 NEVDGDTLTTESTRSTNSVNVQLTIVGQVIVYNQGYLLDIN 10
NE E T+ VN+ L V ++++ ++GY D N
Sbjct: 491 NESSVSNCENEYCECTHVVNIPLGTVVEMVLIDKGYAYDAN 531
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 23.4 bits (48), Expect = 0.90
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 216 LNITLFILCSLSLVEWIL-STQGISLVKHTVKS*RHIYQYF 335
LN+ L + SL+L+E+IL T + L S + YF
Sbjct: 153 LNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYF 193
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 23.4 bits (48), Expect = 0.90
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 216 LNITLFILCSLSLVEWIL-STQGISLVKHTVKS*RHIYQYF 335
LN+ L + SL+L+E+IL T + L S + YF
Sbjct: 153 LNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYF 193
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 23.4 bits (48), Expect = 0.90
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 216 LNITLFILCSLSLVEWIL-STQGISLVKHTVKS*RHIYQYF 335
LN+ L + SL+L+E+IL T + L S + YF
Sbjct: 153 LNVLLAVFMSLALIEYILMQTNKLVLALECNNSTSEGFDYF 193
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.8 bits (44), Expect = 2.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 199 PMN-VADLI*HCLYCVHYLWWNGSCLPRVLAWLSTR*KAKG--TFTNTSLYNLA 351
P+N A+ I +CL+ H+ GS P WL + K + + TNT +L+
Sbjct: 297 PLNSAANPIIYCLFSTHFCRTLGSLPP--FKWLFKKKKRRNRESTTNTQSSSLS 348
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.4 bits (43), Expect = 3.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 243 NTI*TMLY*VSHIHWHFI 190
NTI T+ Y V I WH +
Sbjct: 240 NTIETVAYSVIFILWHIV 257
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 10 IDVQQVSLVINYDLPNNR 63
+ +Q VSL+INY+ R
Sbjct: 114 VKLQNVSLIINYENQRTR 131
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.0 bits (42), Expect = 4.8
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 210 HIHWHFIY 187
H HWH +Y
Sbjct: 207 HWHWHLVY 214
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.0 bits (42), Expect = 4.8
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 210 HIHWHFIY 187
H HWH +Y
Sbjct: 207 HWHWHLVY 214
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,612
Number of Sequences: 336
Number of extensions: 1929
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9174063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -