Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30628
(418 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 149 1e-36
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 149 1e-36
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 126 5e-30
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 126 5e-30
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 126 5e-30
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 85 1e-17
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 73 1e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 73 1e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 69 1e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 67 4e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 67 4e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 65 2e-11
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 65 2e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 64 3e-11
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 64 4e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 63 9e-11
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 63 9e-11
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 63 9e-11
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 62 2e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 61 4e-10
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 61 4e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 61 4e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 61 4e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 61 4e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 60 5e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 60 5e-10
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 60 5e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 60 5e-10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 57 6e-09
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 56 1e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 56 1e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 55 2e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 55 2e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 55 2e-08
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 53 7e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 53 7e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 52 1e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 51 4e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 47 5e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 47 5e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 8e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 43 8e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 43 8e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 41 4e-04
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 40 7e-04
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 40 7e-04
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 40 7e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 39 0.001
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 36 0.012
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 36 0.012
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 35 0.027
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 35 0.027
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 33 0.063
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 30 0.78
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 1.8
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 1.8
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 27 4.1
AC084153-3|AAK84595.1| 153|Caenorhabditis elegans Hypothetical ... 27 5.5
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 26 9.5
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 26 9.5
U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 26 9.5
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 26 9.5
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 149 bits (360), Expect = 1e-36
Identities = 68/74 (91%), Positives = 72/74 (97%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+DV QVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK DD+RILRDIEQYYS
Sbjct: 326 ARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYS 385
Query: 181 TQIDEMPMNVADLI 222
TQIDEMPMN+AD+I
Sbjct: 386 TQIDEMPMNIADII 399
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 149 bits (360), Expect = 1e-36
Identities = 68/74 (91%), Positives = 72/74 (97%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+DV QVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK DD+RILRDIEQYYS
Sbjct: 326 ARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYS 385
Query: 181 TQIDEMPMNVADLI 222
TQIDEMPMN+AD+I
Sbjct: 386 TQIDEMPMNIADII 399
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 126 bits (305), Expect = 5e-30
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARGIDVQQVSLVINYDLP+NRE YIHRIGRSGRFGRKGVAINFV +D R L++IE YY+
Sbjct: 329 ARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYT 388
Query: 181 TQIDEMPMNVADLI 222
TQI+EMP ++ADLI
Sbjct: 389 TQIEEMPESIADLI 402
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 126 bits (305), Expect = 5e-30
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARGIDVQQVSLVINYDLP+NRE YIHRIGRSGRFGRKGVAINFV +D R L++IE YY+
Sbjct: 42 ARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYT 101
Query: 181 TQIDEMPMNVADLI 222
TQI+EMP ++ADLI
Sbjct: 102 TQIEEMPESIADLI 115
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 126 bits (305), Expect = 5e-30
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARGIDVQQVSLVINYDLP+NRE YIHRIGRSGRFGRKGVAINFV +D R L++IE YY+
Sbjct: 329 ARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYT 388
Query: 181 TQIDEMPMNVADLI 222
TQI+EMP ++ADLI
Sbjct: 389 TQIEEMPESIADLI 402
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 85.4 bits (202), Expect = 1e-17
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYST 183
RGID+Q V++VIN+D P N E Y+HRIGRSGRFG GVAIN + +D LR IEQ T
Sbjct: 342 RGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRT 401
Query: 184 QIDEMPMNV 210
+I+ +P V
Sbjct: 402 RIEPIPKTV 410
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 72.5 bits (170), Expect = 1e-13
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DIRILRDIEQYYS 180
RG+D+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV + D + L ++ +
Sbjct: 345 RGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFD 404
Query: 181 TQIDEMPMNV 210
I E+P +
Sbjct: 405 ISITELPEKI 414
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 72.5 bits (170), Expect = 1e-13
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+++++ SL+INYD+ N E Y+ R GR G FG KG+ I+F +DI L+ IE +YS
Sbjct: 288 ARGMNIRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYS 346
Query: 181 TQIDEMP 201
T+I+EMP
Sbjct: 347 TRIEEMP 353
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 72.5 bits (170), Expect = 1e-13
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DIRILRDIEQYYS 180
RG+D+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV + D + L ++ +
Sbjct: 337 RGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFD 396
Query: 181 TQIDEMPMNV 210
I E+P +
Sbjct: 397 ISITELPEKI 406
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 69.3 bits (162), Expect = 1e-12
Identities = 28/70 (40%), Positives = 48/70 (68%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
+RG+D+ V LV+N+++P + YIHR+GRS R GR G A++FV D+ +L+ +EQ
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 181 TQIDEMPMNV 210
++DE+ + +
Sbjct: 458 KKLDELKVKI 467
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 68.5 bits (160), Expect = 2e-12
Identities = 28/69 (40%), Positives = 48/69 (69%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
+RG+D+ V LV+N+++P + YIHR+GRS R GR G A++FV D+ +L+ +EQ
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 181 TQIDEMPMN 207
++DE+ ++
Sbjct: 458 KKLDELKVS 466
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 67.3 bits (157), Expect = 4e-12
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ V +VINYD+P+ + Y+HR+GR+ R GR G+AI V D+ + IE
Sbjct: 344 ARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLG 403
Query: 181 TQIDE 195
++DE
Sbjct: 404 KKLDE 408
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 67.3 bits (157), Expect = 4e-12
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-KSDDIRILRDIEQYY 177
++G+D Q + VIN+D+P + E Y+HRIGR+GR GRKG+A F+ K ++ +L D++Q
Sbjct: 502 SKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLL 561
Query: 178 STQIDEMP 201
+ E+P
Sbjct: 562 AEAGQELP 569
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 66.1 bits (154), Expect = 1e-11
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQ 171
RGIDV+ VSLV+NYD+ + E Y HRIGR+GR G+ G AI F+ DD + D++Q
Sbjct: 635 RGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQ 690
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 65.7 bits (153), Expect = 1e-11
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 19/92 (20%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLP-----------------NNRELYIHRIGRSGRFGRKGVAINF 129
ARGIDV QVS+VINYDLP + E Y+HRIGR+GRFG+ G+AIN
Sbjct: 516 ARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINL 575
Query: 130 VKSDD-IRILRDIEQYYSTQIDEM-PMNVADL 219
+ S+D + ++ +E ++ +I M P N+ +L
Sbjct: 576 IDSEDSMNMINVLENHFQMKIARMDPSNLVEL 607
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 65.7 bits (153), Expect = 1e-11
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 19/92 (20%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLP-----------------NNRELYIHRIGRSGRFGRKGVAINF 129
ARGIDV QVS+VINYDLP + E Y+HRIGR+GRFG+ G+AIN
Sbjct: 541 ARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINL 600
Query: 130 VKSDD-IRILRDIEQYYSTQIDEM-PMNVADL 219
+ S+D + ++ +E ++ +I M P N+ +L
Sbjct: 601 IDSEDSMNMINVLENHFQMKIARMDPSNLVEL 632
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 65.7 bits (153), Expect = 1e-11
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 19/92 (20%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLP-----------------NNRELYIHRIGRSGRFGRKGVAINF 129
ARGIDV QVS+VINYDLP + E Y+HRIGR+GRFG+ G+AIN
Sbjct: 925 ARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINL 984
Query: 130 VKSDD-IRILRDIEQYYSTQIDEM-PMNVADL 219
+ S+D + ++ +E ++ +I M P N+ +L
Sbjct: 985 IDSEDSMNMINVLENHFQMKIARMDPSNLVEL 1016
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK-SDDIRIL 156
RG+D++ V VINYD+PNN + YIHRIGR+GR G G A +F+ +DD++IL
Sbjct: 625 RGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQIL 676
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK-SDDIRIL 156
RG+D++ V VINYD+PNN + YIHRIGR+GR G G A +F+ +DD++IL
Sbjct: 625 RGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQIL 676
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 132
ARG+DV+ + LV+NYD PN+ E Y+HR+GR+GR GRKG A FV
Sbjct: 613 ARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFV 656
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/73 (39%), Positives = 41/73 (56%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+DV + VINYD PNN E Y+HRIGR+GR +KG A F + +D+ +
Sbjct: 437 ARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLD 496
Query: 181 TQIDEMPMNVADL 219
+P + D+
Sbjct: 497 EAKQTVPQALRDM 509
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 62.9 bits (146), Expect = 9e-11
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ V VINYDLP + + Y+HRIGR+GR G G+A +F + I RD++
Sbjct: 459 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIV 518
Query: 181 TQIDEMP 201
E+P
Sbjct: 519 ESNQEVP 525
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 62.9 bits (146), Expect = 9e-11
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ V VINYDLP + + Y+HRIGR+GR G G+A +F + I RD++
Sbjct: 443 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIV 502
Query: 181 TQIDEMP 201
E+P
Sbjct: 503 ESNQEVP 509
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 62.9 bits (146), Expect = 9e-11
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ V VINYDLP + + Y+HRIGR+GR G G+A +F + I RD++
Sbjct: 440 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIV 499
Query: 181 TQIDEMP 201
E+P
Sbjct: 500 ESNQEVP 506
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 61.7 bits (143), Expect = 2e-10
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ V VINYDLP++ + Y+HRIGR+GR G G+A +F + I R++
Sbjct: 488 ARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIV 547
Query: 181 TQIDEMP 201
E+P
Sbjct: 548 EANQELP 554
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 60.9 bits (141), Expect = 4e-10
Identities = 26/73 (35%), Positives = 44/73 (60%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ ++ VIN+D+ + + ++HRIGR+GR G KG A V DI ++ + +
Sbjct: 571 ARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLE 630
Query: 181 TQIDEMPMNVADL 219
+ E+P + DL
Sbjct: 631 SVSQEVPKPLMDL 643
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 60.9 bits (141), Expect = 4e-10
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 165
RG+D+ V LVINYDLP + YIHR+GR+GR G+ G A+ + D++ ++ I
Sbjct: 437 RGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMKYIKSI 490
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
RG+D++ V VINYD+P+N + YIHRIGR+GR G G A +F+ S+D +L ++ + S
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFI-SEDCNLLSELVRVLS 936
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
RG+D++ V VINYD+P+N + YIHRIGR+GR G G A +F+ S+D +L ++ + S
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFI-SEDCNLLSELVRVLS 936
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
RG+D++ V VINYD+P+N + YIHRIGR+GR G G A +F+ S+D +L ++ + S
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFI-SEDCNLLSELVRVLS 936
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 60.5 bits (140), Expect = 5e-10
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 165
RG+D++ V VINYD+P+N + YIHRIGR+GR G G A +F+ S+D +L ++
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFI-SEDCSLLSEL 720
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 60.5 bits (140), Expect = 5e-10
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 165
RG+D++ V VINYD+P+N + YIHRIGR+GR G G A +F+ S+D +L ++
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFI-SEDCSLLSEL 720
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 60.5 bits (140), Expect = 5e-10
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
+RGIDV ++ V+NYD P + E Y+HR+GR+GR GRKG A++F+ +D + Q
Sbjct: 399 SRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILE 458
Query: 181 TQIDEMP 201
E+P
Sbjct: 459 KSEQEVP 465
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 60.5 bits (140), Expect = 5e-10
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +1
Query: 4 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 165
RG+D++ V VINYD+P+N + YIHRIGR+GR G G A +F+ S+D +L ++
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFI-SEDCSLLSEL 720
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 56.8 bits (131), Expect = 6e-09
Identities = 22/66 (33%), Positives = 41/66 (62%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARGID+ + VI +DLP + ++HR GR+ R GR+G A+ + S+ + + ++ +
Sbjct: 320 ARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGREGNALILIASEQLAYVNFLDNHEK 379
Query: 181 TQIDEM 198
++DE+
Sbjct: 380 VKLDEI 385
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ + VIN P +L++HR+GR R GR G AI+ + +D++ L D+ +
Sbjct: 326 ARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLG 385
Query: 181 TQID 192
I+
Sbjct: 386 KPIN 389
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
ARG+D+ + VIN P +L++HR+GR R GR G AI+ + +D++ L D+ +
Sbjct: 326 ARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLG 385
Query: 181 TQID 192
I+
Sbjct: 386 KPIN 389
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 55.2 bits (127), Expect = 2e-08
Identities = 22/55 (40%), Positives = 40/55 (72%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 165
+RG+D++ V VIN ++P + + YIHR+GR+ R G+ G +I+ V D+ ++L++I
Sbjct: 478 SRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKLLKEI 532
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD 141
ARGID V+LV+N D N E Y HRIGR+ RFG G A+ ++ +
Sbjct: 320 ARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDE 366
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD 141
ARGID V+LV+N D N E Y HRIGR+ RFG G A+ ++ +
Sbjct: 320 ARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDE 366
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 53.2 bits (122), Expect = 7e-08
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
+RGID VS V+N+D P + YIHR+GR+ R KG A++F + L I++ +
Sbjct: 369 SRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQEEIN 428
Query: 181 TQI 189
Q+
Sbjct: 429 QQM 431
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 53.2 bits (122), Expect = 7e-08
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 180
+RGID VS V+N+D P + YIHR+GR+ R KG A++F + L I++ +
Sbjct: 436 SRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQEEIN 495
Query: 181 TQI 189
Q+
Sbjct: 496 QQM 498
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 52.4 bits (120), Expect = 1e-07
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 132
ARG+DVQ V VI+ LP+ + +Y+HRIGR GR R G++I+ V
Sbjct: 566 ARGLDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMGLSISLV 609
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 50.8 bits (116), Expect = 4e-07
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 153
ARG D+ +V VINY+LP + +L++HR GR+GR G+ G I+ + R+
Sbjct: 460 ARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQDGYVISVGDKESKRL 510
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 47.2 bits (107), Expect = 5e-06
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 132
ARG+D+Q + VI+Y +P E+YIHR GR+ R +G+ + V
Sbjct: 334 ARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 377
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 47.2 bits (107), Expect = 5e-06
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 132
ARG+D+Q + VI+Y +P E+YIHR GR+ R +G+ + V
Sbjct: 501 ARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 544
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 8e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 7/51 (13%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPN-----NRELYIHRIGRSGRFGRK--GVAINFV 132
+RGIDV + VIN+DLP+ + +IHR GR+GR GRK G+ ++FV
Sbjct: 707 SRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRKENGLCVSFV 757
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 8e-05
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLP--NNRELYIHRIGRSGRFGRKGVAINFV 132
ARG+++ + V+NYD+P N + Y++RIGR+GR G G + FV
Sbjct: 1063 ARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFV 1108
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 8e-05
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLP--NNRELYIHRIGRSGRFGRKGVAINFV 132
ARG+++ + V+NYD+P N + Y++RIGR+GR G G + FV
Sbjct: 1063 ARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFV 1108
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 40.7 bits (91), Expect = 4e-04
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK-SDDIRILRDIEQYY 177
+RG+D + + VI D P + YIHR+GRS R G ++ V S + ++ +E+ +
Sbjct: 383 SRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVSPSQEEAMIGKLEK-H 441
Query: 178 STQIDEMPMN 207
S I+E+ ++
Sbjct: 442 SIPIEELKIH 451
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 39.9 bits (89), Expect = 7e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN-FVKSDDIRILRDIEQ-YYS 180
GID V VI+Y LP + E Y GR+GR G + + D IR+ R IE+ +
Sbjct: 532 GIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTT 591
Query: 181 TQIDEMPM-NVADLI*HC 231
T + M + NV ++ +C
Sbjct: 592 TGVRSMHLNNVLQVVAYC 609
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 39.9 bits (89), Expect = 7e-04
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQ 186
GID V VI+Y PNN E Y IGR+GR G + F D+ ++ + S Q
Sbjct: 509 GIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSPSICRVFWAPKDLNTIK-FKLRNSQQ 567
Query: 187 IDEMPMNVADLI 222
+E+ N+ ++
Sbjct: 568 KEEVVENLTMML 579
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 39.9 bits (89), Expect = 7e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN-FVKSDDIRILRDIEQ-YYS 180
GID V VI+Y LP + E Y GR+GR G + + D IR+ R IE+ +
Sbjct: 532 GIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTT 591
Query: 181 TQIDEMPM-NVADLI*HC 231
T + M + NV ++ +C
Sbjct: 592 TGVRSMHLNNVLQVVAYC 609
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR-FGRKGVAINFVKSDDIRILR 159
ARG+D+ V ++ YD + YIHR+GR+ R G A+ ++ +++ LR
Sbjct: 375 ARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLR 428
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 35.9 bits (79), Expect = 0.012
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 147
GID V VI++ LP + E Y GR+GR G+ I + + DI
Sbjct: 372 GIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADI 418
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 35.9 bits (79), Expect = 0.012
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 147
GID V VI++ LP + E Y GR+GR G+ I + + DI
Sbjct: 395 GIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADI 441
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 34.7 bits (76), Expect = 0.027
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIR 150
ARGIDV V I ++ + + Y HRIGR GR G G + V+ ++
Sbjct: 437 ARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDGCGGKSTVLVEHHQLQ 486
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.027
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 120
+RGIDV V I ++ + Y+HRIGR GR G G A
Sbjct: 435 SRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGGRA 474
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 33.5 bits (73), Expect = 0.063
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 117
G+DV+Q +LVI +D P + Y+ GR+ R G + V
Sbjct: 466 GVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGSRYV 502
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 123
G+D+ + SLVI Y+ N ++ R GR+ K V I
Sbjct: 361 GLDIPECSLVIKYNYATNETAHVQRRGRARARNSKCVLI 399
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 1 ARGIDVQQVSLVINYDLPNNRELYIHRIGR 90
ARGIDV V I ++ + + Y HRIGR
Sbjct: 284 ARGIDVSSVKHTIIMEMSADFDTYKHRIGR 313
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 123
G+DV + SLVI Y+ N ++ R GR + V I
Sbjct: 779 GLDVPECSLVIKYNYATNEIAHVQRRGRGRALNSECVLI 817
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 123
G+DV + SLVI Y+ N ++ R GR + V I
Sbjct: 779 GLDVPECSLVIKYNYATNEIAHVQRRGRGRALNSECVLI 817
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 7 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA-INFVKSD 141
GID V VI++ N Y GR+GR G++ I + K D
Sbjct: 477 GIDKPDVRAVIHWSPSQNLAGYYQEAGRAGRDGKRSYCRIYYSKQD 522
>AC084153-3|AAK84595.1| 153|Caenorhabditis elegans Hypothetical
protein Y22D7AL.6 protein.
Length = 153
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 106 DRIDPIYQFCECTTHDCWASHSL*PR 29
++ID +YQ +C H CW L PR
Sbjct: 118 EKID-VYQCRKCIFHSCWLGSRLLPR 142
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -1
Query: 340 IMKYW*MCL*LFTVCLTRLIPWVDKIHSTKDNE---HNINNVILSQPHSLAFHLFE 182
+++Y MC+ +F + TR P + TKD + ++ NV + H++ +FE
Sbjct: 623 LLRYGVMCMDVFVLPTTRNQPQMHSSMRTKDEKDALESLANVFTTIDHAIFREIFE 678
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical
protein C47D12.1b protein.
Length = 4061
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -1
Query: 340 IMKYW*MCL*LFTVCLTRLIPWVDKIHSTKDNE---HNINNVILSQPHSLAFHLFE 182
+++Y MC+ +F + TR P + TKD + ++ NV + H++ +FE
Sbjct: 623 LLRYGVMCMDVFVLPTTRNQPQMHSSMRTKDEKDALESLANVFTTIDHAIFREIFE 678
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical
protein C47D12.1a protein.
Length = 4064
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -1
Query: 340 IMKYW*MCL*LFTVCLTRLIPWVDKIHSTKDNE---HNINNVILSQPHSLAFHLFE 182
+++Y MC+ +F + TR P + TKD + ++ NV + H++ +FE
Sbjct: 623 LLRYGVMCMDVFVLPTTRNQPQMHSSMRTKDEKDALESLANVFTTIDHAIFREIFE 678
>U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical
protein C03F11.4 protein.
Length = 389
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 412 FFFFYTIKHLCFDNTEIQILRLSYIMK 332
F F T+ D T+ ++L LS++MK
Sbjct: 246 FMFLKTLNEKSVDYTKFEVLTLSFVMK 272
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -1
Query: 340 IMKYW*MCL*LFTVCLTRLIPWVDKIHSTKDNE---HNINNVILSQPHSLAFHLFE 182
+++Y MC+ +F + TR P + TKD + ++ NV + H++ +FE
Sbjct: 623 LLRYGVMCMDVFVLPTTRNQPQMHSSMRTKDEKDALESLANVFTTIDHAIFREIFE 678
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,220,253
Number of Sequences: 27780
Number of extensions: 173613
Number of successful extensions: 430
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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