Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30627
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 132 3e-31
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 129 2e-30
07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748... 118 6e-27
02_04_0080 - 19529575-19529643,19529756-19529938,19530061-195302... 60 2e-09
11_06_0724 - 26696401-26696703,26696875-26697025,26697115-266971... 31 0.67
04_04_1551 - 34348110-34348225,34348468-34348606,34348658-343488... 31 0.89
01_01_0348 + 2769295-2769660,2770082-2770192,2770284-2770358,277... 31 1.2
12_01_0372 + 2867471-2867775,2867805-2867901,2868539-2868916 30 2.0
03_06_0732 - 35788417-35788485,35788776-35788871,35788963-357891... 30 2.0
01_02_0129 + 11410345-11410487,11410908-11411014,11414512-114147... 30 2.0
05_05_0262 - 23666184-23666262,23666564-23667759 29 2.7
10_08_0603 - 19120434-19120538,19121209-19121310,19121430-191214... 29 3.6
10_07_0019 + 11931519-11932310 29 4.7
08_02_0879 + 22183052-22183340,22183802-22183949,22184017-22184044 29 4.7
02_02_0210 + 7873962-7874753 29 4.7
02_02_0209 + 7866348-7867139 29 4.7
12_02_0908 - 24214221-24215933 28 6.2
06_01_1061 + 8562039-8562485 28 6.2
03_06_0566 + 34760991-34761186,34761283-34761455,34762370-347624... 28 6.2
03_05_0955 + 29168771-29170507 28 6.2
02_02_0473 - 10727908-10728052,10728367-10728440,10728660-107288... 28 6.2
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 28 8.3
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 132 bits (318), Expect = 3e-31
Identities = 57/87 (65%), Positives = 70/87 (80%)
Frame = +1
Query: 4 KRYKPFKKLHNRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 183
+R++ F NR LLWHGSR TN+AGI+SQGLRIAPPEAP++G+MFGKG+YFADM SKSA
Sbjct: 434 ERFQKFASAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADMFSKSA 493
Query: 184 NYCCTTRNNPVGLMLLCEVALGNIRSV 264
NYCC + G+MLLCEVALG + +
Sbjct: 494 NYCCASEACKSGVMLLCEVALGEMNEL 520
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/74 (39%), Positives = 50/74 (67%)
Frame = +3
Query: 276 GFSKAPSGTHSVWGVGRTEPDPKMNKELPDGLIVPLGTPVDRAENSTLLYNEFIVYDVAQ 455
G P+G S GVG+TEP+ +K DG+++PLG P E +L+YNE+IVY+V Q
Sbjct: 526 GADNLPNGKLSTKGVGQTEPNIAESKITDDGMVIPLGKP----EKGSLMYNEYIVYNVDQ 581
Query: 456 VKVKYLIEMRFDYR 497
++++Y++ + F+++
Sbjct: 582 IRMRYILNVNFNFK 595
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 129 bits (311), Expect = 2e-30
Identities = 58/87 (66%), Positives = 69/87 (79%)
Frame = +1
Query: 4 KRYKPFKKLHNRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 183
+R++ F NR LLWHGSR TN+AGI+SQGLRIAPPEAPVTGYMFGKG+YFADM SKSA
Sbjct: 492 ERFQKFATAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSA 551
Query: 184 NYCCTTRNNPVGLMLLCEVALGNIRSV 264
NYC + G++LLCEVALG + +
Sbjct: 552 NYCYASEACRSGVLLLCEVALGEMNEL 578
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 249 EYKECVNAE-GFSKAPSGTHSVWGVGRTEPDPKMNKELPDGLIVPLGTP-VDRAENSTLL 422
E E +NA+ + P G S GVG+TEP+ +K DG++VPLG P + ++ +LL
Sbjct: 574 EMNELLNADYDANNLPKGKLSTKGVGQTEPNTAESKITDDGVVVPLGKPKAEPSKRGSLL 633
Query: 423 YNEFIVYDVAQVKVKYLIEM 482
YNEFIVY+V Q++++ E+
Sbjct: 634 YNEFIVYNVDQIRMRLSKEL 653
>07_03_0061 + 12972944-12973054,12974509-12974536,12974701-12974870,
12975878-12976043,12976122-12976425,12977155-12977350,
12977464-12977622,12978311-12978371,12978904-12978967,
12979099-12979346,12980039-12980250,12980344-12980456,
12980547-12980623,12980710-12980873,12981493-12981564,
12981565-12981760,12981813-12981854,12982358-12982440,
12982534-12982671,12982942-12983124,12983216-12983263
Length = 944
Score = 118 bits (283), Expect = 6e-27
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +1
Query: 55 GSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTTRNNPVGLMLLC 234
GSR TN+ GI+SQGLRIAPPEAPVTGYMFGKG+YFAD+VSKSA YC R NPVGLMLL
Sbjct: 795 GSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNPVGLMLLS 854
Query: 235 EVALGNIRSVSMLKVSLKP 291
EVALG++ + KP
Sbjct: 855 EVALGDMYELKKATSMDKP 873
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +3
Query: 258 ECVNAEGFSKAPSGTHSVWGVGRTEPDPKMNKELPDGLIVPLGTPVDRA-ENSTLLYNEF 434
E A K P G HS G+G+T P + D ++VP G PV + + S L+YNE+
Sbjct: 863 ELKKATSMDKPPRGKHSTKGLGKTVPLESEFAKWRDDVVVPCGKPVPASIKTSELMYNEY 922
Query: 435 IVYDVAQVKVKYLIEMRFDYR 497
IVY+ +QVK++YL+++RF ++
Sbjct: 923 IVYNTSQVKMQYLLKVRFHHK 943
>02_04_0080 -
19529575-19529643,19529756-19529938,19530061-19530210,
19530297-19530379,19530497-19530599,19530709-19530918,
19531023-19531183,19531275-19531351,19531483-19531610,
19531695-19531935,19532047-19532180,19532261-19532435,
19532587-19532656,19532746-19532803,19532887-19532994,
19533088-19533283,19533381-19533727,19534008-19534034,
19534334-19534336
Length = 840
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +1
Query: 10 YKPFKKLHNRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANY 189
Y KKL N+ LLW G+R++N + G A PV GYMFGK I +D +++A Y
Sbjct: 665 YDEIKKLPNKVLLWCGTRSSNLLRHLRDGFVPAVCHIPVPGYMFGKAIVCSDAAAEAALY 724
Query: 190 CCTTRNNPVGLMLLCEVALG 249
T + P G ++L +LG
Sbjct: 725 GFTAVDRPEGYLVLAVASLG 744
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 309 VWGVGRTEPDPKMNKELPDGLIVPLGTPVDRA-ENSTLLYNEFIVYDVAQVKVKYLIEMR 485
V GVGR DP + DG+ VP G V ++ L YNE+ VYD QV + +L+ ++
Sbjct: 769 VKGVGRKTTDPSEHFTWRDGVTVPCGKLVPSTNKDGPLEYNEYAVYDPKQVSIAFLVGVK 828
Query: 486 FD 491
++
Sbjct: 829 YE 830
>11_06_0724 -
26696401-26696703,26696875-26697025,26697115-26697184,
26697526-26697736,26697928-26698085,26698684-26699500
Length = 569
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -3
Query: 508 CNYYL*SNLISIRYFTLT*ATSYTMNSLYSSVLFSALSTGVPSGTMSPSGNSLFIFGSGS 329
C ++L +++ + + + ++ YT NS+Y S L S LS+ + S +LF GS
Sbjct: 12 CFFFLPMPMVAAQPWMICGSSKYTANSIYQSNLDSLLSSSFLVVSGDSSSGALFAKGSRG 71
Query: 328 VRP 320
P
Sbjct: 72 AAP 74
>04_04_1551 -
34348110-34348225,34348468-34348606,34348658-34348896,
34349042-34349140,34349207-34350188,34350737-34350832,
34350936-34351064,34351253-34351332,34351420-34351661,
34351743-34352692
Length = 1023
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/77 (29%), Positives = 29/77 (37%)
Frame = +1
Query: 34 NRRLLWHGSRTTNFAGIISQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTTRNNP 213
N R W GSR + I+ G A G G + D S C
Sbjct: 269 NVRYGWLGSRKNDIVRILINGFGNNGKPAEKAGLSAGVYLSPEDRAFSSVGLCDVDEKG- 327
Query: 214 VGLMLLCEVALGNIRSV 264
V MLLC + LGN+ +V
Sbjct: 328 VQYMLLCRLILGNMEAV 344
>01_01_0348 +
2769295-2769660,2770082-2770192,2770284-2770358,
2770566-2770626,2770853-2770926,2771004-2771108,
2771475-2771582,2771681-2771784,2771939-2772088,
2772163-2772286,2772746-2772925
Length = 485
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 33 QPPPLVARLPH---HQLRRHYFTRSSYCAARSSSHGL 134
QP ARLP LRRH R+S C R+S HGL
Sbjct: 15 QPRAAAARLPMLTLPSLRRHGGRRASACRVRASLHGL 51
>12_01_0372 + 2867471-2867775,2867805-2867901,2868539-2868916
Length = 259
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 27 TPQPPPLVARLPHHQLRRHYFTRSSYCAARSSSHG 131
+P PPP + L H LRRH+ + SS A S+ G
Sbjct: 5 SPPPPPPSSCLSHGLLRRHHRSGSSAAATAYSAAG 39
>03_06_0732 -
35788417-35788485,35788776-35788871,35788963-35789148,
35789898-35789959,35790063-35790304,35790418-35791517
Length = 584
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +1
Query: 34 NRRLLWHGSRTTNFAGIISQG-LRIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTTRN- 207
N R W ++ G L IA P + G M+G G + A + S+N C +
Sbjct: 319 NERYAWLACTKGTMEEMMMNGALEIAKP---LQGPMYGVGAHLAP--ANSSNICVGLSDI 373
Query: 208 --NPVGLMLLCEVALGNIRSV 264
N + M+LC V +GN+ V
Sbjct: 374 DENGIIRMMLCRVIMGNVEVV 394
>01_02_0129 +
11410345-11410487,11410908-11411014,11414512-11414786,
11415014-11415179,11415681-11415922,11417046-11417141,
11417574-11417761,11418573-11418789
Length = 477
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 6 ALQALQETPQPPPLVARLPHHQLRRHYFTRSSYCAARSSSHGL-HVRQGHILCGHGLQVC 182
AL A ++ P+ PP A P H RR ++ + R H L ++ H + G LQV
Sbjct: 13 ALAATRQAPRCPPAAAAPPTHGYRR----GAAVLSGRRGRHTLSSIQLMHAVRGGNLQVE 68
Query: 183 QLLLHHQK 206
+LH K
Sbjct: 69 PNMLHSPK 76
>05_05_0262 - 23666184-23666262,23666564-23667759
Length = 424
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 15 ALQETPQPPPLVARLPHHQLRRHYFTRSSYCAARSSSHG 131
A+ PQPPP LP +RR Y T + A ++HG
Sbjct: 39 AVAPQPQPPPGTRPLPSILVRRAYRTSFACALAGCATHG 77
>10_08_0603 -
19120434-19120538,19121209-19121310,19121430-19121462,
19122049-19122216,19122311-19122373,19122514-19122624,
19122926-19123035,19123150-19123446,19123632-19123710,
19123811-19123919,19124000-19124041,19124743-19124873,
19126150-19126797
Length = 665
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 14 SPSRNSTTAASCGTAPAPPTSPALFHKVFVLRRPKLQSRATCSAR 148
SP+ ++TT P PP SPA K + RR +S AT A+
Sbjct: 91 SPAPSATTPRRFFRRPFPPPSPAKHIKASLARRLGQRSPATAQAQ 135
>10_07_0019 + 11931519-11932310
Length = 263
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -3
Query: 82 CRRSWWCGSRAT-RGGGCG 29
CRR WWC S T RGGG G
Sbjct: 40 CRR-WWCRSEPTSRGGGWG 57
>08_02_0879 + 22183052-22183340,22183802-22183949,22184017-22184044
Length = 154
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 14 SPSRNSTTAASCGTAPAPPTSPALFHKVFVLRRPKL 121
SPS +S AA+ GTAP + + + ++R P L
Sbjct: 31 SPSSSSAAAAAPGTAPPDAPAATVTRSITIVRPPSL 66
>02_02_0210 + 7873962-7874753
Length = 263
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 82 CRRSWWCGSRATRGGGCG 29
C R WWC +R GG G
Sbjct: 51 CWRRWWCSGATSRRGGMG 68
>02_02_0209 + 7866348-7867139
Length = 263
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 82 CRRSWWCGSRATRGGGCG 29
C R WWC +R GG G
Sbjct: 51 CWRRWWCSGATSRRGGMG 68
>12_02_0908 - 24214221-24215933
Length = 570
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 50 GTAPAPPTSPALFHKVFVLRRPKLQSRATCSAR 148
G AP+PP P L H + ++++P +S A +AR
Sbjct: 84 GAAPSPPAMPVLGH-LHLIKKPLHRSLAEVAAR 115
>06_01_1061 + 8562039-8562485
Length = 148
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 82 CRRSWWCGSRATRGGGCG 29
CRR WW +RGGG G
Sbjct: 43 CRRWWWRSEPTSRGGGRG 60
>03_06_0566 +
34760991-34761186,34761283-34761455,34762370-34762416,
34762546-34762640,34762734-34762816,34763331-34763399,
34763874-34764059,34764374-34764508,34764774-34764908,
34765148-34765218,34765393-34765470,34765626-34765767,
34765940-34766050
Length = 506
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 139 TCSP*LELRAAQYEDLVK*CRRSWWCGSRATRG--GGCGVS 23
+CS E + E+LVK CR + G+R T GGC V+
Sbjct: 415 SCSVLYECSCPELEELVKVCRDNGALGARLTGAGWGGCAVA 455
>03_05_0955 + 29168771-29170507
Length = 578
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +3
Query: 30 PQPPPLVARLPHHQLRRHYFTRSSYCA---ARSSSHG 131
P PPP + PHH ++H+ A A SSHG
Sbjct: 39 PPPPPPQSMAPHHHQQKHHHHHQQMPAMPQAPPSSHG 75
>02_02_0473 -
10727908-10728052,10728367-10728440,10728660-10728818,
10729606-10729774,10730216-10730355,10730469-10730879,
10731055-10731334,10731508-10731571,10731995-10733281,
10733363-10733822,10733988-10734356
Length = 1185
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 52 HGSRTTNFAGI---ISQGLRIAPPEAPVTGYMFGKGIYFADMVSK 177
+G TTN AG+ + +G+R+ P A V + G YF D K
Sbjct: 450 YGIMTTNLAGVYNWVMRGVRVLPLVAIVEFILHGTQAYFRDRHKK 494
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 109 PPEAPVTGYMFGKGIYFADMVSKSANYCCTTRNNPVGLMLLCEVA 243
PP A VT GK + + +S S N+ + NP G + + V+
Sbjct: 621 PPHALVTFGFGGKLVVVRETISMSTNFDSGNQGNPCGTVSILNVS 665
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,786,011
Number of Sequences: 37544
Number of extensions: 422785
Number of successful extensions: 1692
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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